Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing SO0853 gene

Properties
Regulog: NagR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: N-acetylglucosamine utilization
Effector: N-acetylglucosamine
Phylum: Proteobacteria/gamma
Built upon 105 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella oneidensis MR-1
Position: -83
Score: 5.66556
Sequence: CATGACAACGTTGTCAAA
Locus tag: SO_0854
Name: SO0854
Funciton: Type IV pilus biogenesis protein PilE
Locus tag: SO_0853
Name: SO0853
Funciton: Type IV fimbrial biogenesis protein FimT
Locus tag: SO_0852
Name: SO0852
Funciton: Type IV fimbrial biogenesis protein PilV
Locus tag: SO_0851
Name: SO0851
Funciton: prepilin-type cleavage/methylation-like protein
Locus tag: SO_0850
Name: SO0850
Funciton: Type IV fimbrial biogenesis protein PilX
SO0854-SO0853-SO0852-SO0851-SO0850 -83 5.7 CATGACAACGTTGTCAAA SO_0854
Shewanella sp ANA-3
Position: -91
Score: 5.43276
Sequence: TATGACAACGTTGTCAAA
Locus tag: Shewana3_3424
Name: SO0854
Funciton: Type IV pilus biogenesis protein PilE
Locus tag: Shewana3_3425
Name: SO0853
Funciton: Type IV fimbrial biogenesis protein FimT
Locus tag: Shewana3_3426
Name: SO0852
Funciton: Type IV fimbrial biogenesis protein PilV
Locus tag: Shewana3_3427
Name: SO0851
Funciton: prepilin-type cleavage/methylation-like protein
Locus tag: Shewana3_3428
Name: SO0850
Funciton: Type IV fimbrial biogenesis protein PilX
SO0854-SO0853-SO0852-SO0851-SO0850 -91 5.4 TATGACAACGTTGTCAAA Shewana3_3424
Shewanella sp MR-4
Position: -91
Score: 5.43276
Sequence: TATGACAACGTTGTCAAA
Locus tag: Shewmr4_0710
Name: SO0854
Funciton: Type IV pilus biogenesis protein PilE
Locus tag: Shewmr4_0709
Name: SO0853
Funciton: Type IV fimbrial biogenesis protein FimT
Locus tag: Shewmr4_0708
Name: SO0852
Funciton: Type IV fimbrial biogenesis protein PilV
Locus tag: Shewmr4_0707
Name: SO0851
Funciton: prepilin-type cleavage/methylation-like protein
Locus tag: Shewmr4_0706
Name: SO0850
Funciton: Type IV fimbrial biogenesis protein PilX
SO0854-SO0853-SO0852-SO0851-SO0850 -91 5.4 TATGACAACGTTGTCAAA Shewmr4_0710
Shewanella sp MR-7
Position: -91
Score: 5.43276
Sequence: TATGACAACGTTGTCAAA
Locus tag: Shewmr7_3312
Name: SO0854
Funciton: Type IV pilus biogenesis protein PilE
Locus tag: Shewmr7_3313
Name: SO0853
Funciton: Type IV fimbrial biogenesis protein FimT
Locus tag: Shewmr7_3314
Name: SO0852
Funciton: Type IV fimbrial biogenesis protein PilV
Locus tag: Shewmr7_3315
Name: SO0851
Funciton: prepilin-type cleavage/methylation-like protein
Locus tag: Shewmr7_3316
Name: SO0850
Funciton: Type IV fimbrial biogenesis protein PilX
SO0854-SO0853-SO0852-SO0851-SO0850 -91 5.4 TATGACAACGTTGTCAAA Shewmr7_3312