Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing sapC gene

Properties
Regulog: NagR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: N-acetylglucosamine utilization
Effector: N-acetylglucosamine
Phylum: Proteobacteria/gamma
Built upon 105 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella halifaxensis HAW-EB4
Position: -149
Score: 6.13322
Sequence: ATTGACAACGTTGTCACT
Locus tag: Shal_1147
Name: sapC
Funciton: Peptide transport system permease protein sapC (TC 3.A.1.5.5)
sapC -149 6.1 ATTGACAACGTTGTCACT Shal_1147
Shewanella loihica PV-4
Position: -374
Score: 5.696
Sequence: TATGACAACGCTGTCAAC
Locus tag: Shew_1114
Name: sapC
Funciton: Peptide transport system permease protein sapC (TC 3.A.1.5.5)
sapC -374 5.7 TATGACAACGCTGTCAAC Shew_1114
Shewanella oneidensis MR-1
Position: -74
Score: 6.16766
Sequence: CATGACAGCGTTGTCATT
Locus tag: SO_3514
Name: omp_nag
Funciton: N-acetylglucosamine-regulated TonB-dependent outer membrane receptor
Locus tag: SO_3513
Name: trpX
Funciton: Tryptophan halogenase
Locus tag: SO_3512
Name: sapC
Funciton: Peptide transport system permease protein sapC (TC 3.A.1.5.5)
omp_nag-trpX-sapC -74 6.2 CATGACAGCGTTGTCATT SO_3514
Shewanella pealeana ATCC 700345
Position: -117
Score: 6.13322
Sequence: ATTGACAACGTTGTCACT
Locus tag: Spea_1099
Name: sapC
Funciton: Peptide transport system permease protein sapC (TC 3.A.1.5.5)
sapC -117 6.1 ATTGACAACGTTGTCACT Spea_1099
Shewanella piezotolerans WP3
Position: -129
Score: 5.3555
Sequence: AATGACAACGCTGTCTAA
Locus tag: swp_3708
Name: duf81
Funciton: protein of unknown function DUF81
Locus tag: swp_3709
Name: sapC
Funciton: Peptide transport system permease protein sapC (TC 3.A.1.5.5)
Locus tag: swp_3710
Name: trpX
Funciton: Tryptophan halogenase
duf81-sapC-trpX -129 5.4 AATGACAACGCTGTCTAA swp_3708
Shewanella sediminis HAW-EB3
Position: -293
Score: 6.39555
Sequence: GATGACAACGCTGTCATT
Position: -139
Score: 5.23531
Sequence: TATGACAACGCTGTCAAA
Locus tag: Ssed_1210
Name: sapC
Funciton: Peptide transport system permease protein sapC (TC 3.A.1.5.5)
sapC -293 6.4 GATGACAACGCTGTCATT Ssed_1210
-139 5.2 TATGACAACGCTGTCAAA
Shewanella sp ANA-3
Position: -74
Score: 6.16766
Sequence: CATGACAGCGTTGTCATT
Locus tag: Shewana3_3121
Name: omp_nag
Funciton: N-acetylglucosamine-regulated TonB-dependent outer membrane receptor
Locus tag: Shewana3_3120
Name: trpX
Funciton: Tryptophan halogenase
Locus tag: Shewana3_3119
Name: sapC
Funciton: Peptide transport system permease protein sapC (TC 3.A.1.5.5)
omp_nag-trpX-sapC -74 6.2 CATGACAGCGTTGTCATT Shewana3_3121
Shewanella sp MR-4
Position: -74
Score: 6.16766
Sequence: CATGACAGCGTTGTCATT
Locus tag: Shewmr4_2942
Name: omp_nag
Funciton: N-acetylglucosamine-regulated TonB-dependent outer membrane receptor
Locus tag: Shewmr4_2941
Name: trpX
Funciton: Tryptophan halogenase
Locus tag: Shewmr4_2940
Name: sapC
Funciton: Peptide transport system permease protein sapC (TC 3.A.1.5.5)
omp_nag-trpX-sapC -74 6.2 CATGACAGCGTTGTCATT Shewmr4_2942
Shewanella sp MR-7
Position: -348
Score: 5.13196
Sequence: GCCGACAGCGTTGTCAGC
Position: -74
Score: 6.16766
Sequence: CATGACAGCGTTGTCATT
Locus tag: Shewmr7_3024
Name: omp_nag
Funciton: N-acetylglucosamine-regulated TonB-dependent outer membrane receptor
Locus tag: Shewmr7_3023
Name: trpX
Funciton: Tryptophan halogenase
Locus tag: Shewmr7_3022
Name: sapC
Funciton: Peptide transport system permease protein sapC (TC 3.A.1.5.5)
omp_nag-trpX-sapC -348 5.1 GCCGACAGCGTTGTCAGC Shewmr7_3024
-74 6.2 CATGACAGCGTTGTCATT
Shewanella woodyi ATCC 51908
Position: -92
Score: 5.7374
Sequence: TATGACAACGCTGTCAAT
Locus tag: Swoo_1308
Name: duf81
Funciton: protein of unknown function DUF81
Locus tag: Swoo_1307
Name: sapC
Funciton: Peptide transport system permease protein sapC (TC 3.A.1.5.5)
duf81-sapC -92 5.7 TATGACAACGCTGTCAAT Swoo_1308
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