Orthologous regulated operons containing COG2423 gene

Properties
Regulog:	HypR - Shewanellaceae
Regulator type:	Transcription factor
Regulator family:	GntR/Others
Regulation mode:	activator (repressor)
Biological process:	Proline and 4-hydrohyproline utilization
Effector:	Proline; 4-hydroxyproline
Phylum:	Proteobacteria/gamma

Built upon 96 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -42 Score: 3.75862 Sequence: AGTACATACAAT Locus tag: Sama_2610 Name: COG2423 Funciton: Predicted ornithine cyclodeaminase, mu-crystallin homolog
COG2423	-42	3.8	AGTACATACAAT	Sama_2610
Shewanella halifaxensis HAW-EB4
Position: -32 Score: 4.59854 Sequence: ATAGTATAAAAT Locus tag: Shal_3252 Name: COG2423 Funciton: Predicted ornithine cyclodeaminase, mu-crystallin homolog
COG2423	-32	4.6	ATAGTATAAAAT	Shal_3252
Shewanella loihica PV-4
Position: -36 Score: 4.65294 Sequence: TTTGCATACAAT Locus tag: Shew_2955 Name: COG2423 Funciton: Predicted ornithine cyclodeaminase, mu-crystallin homolog
COG2423	-36	4.7	TTTGCATACAAT	Shew_2955
Shewanella pealeana ATCC 700345
Position: -32 Score: 4.59854 Sequence: ATAGTATAAAAT Locus tag: Spea_3170 Name: COG2423 Funciton: Predicted ornithine cyclodeaminase, mu-crystallin homolog
COG2423	-32	4.6	ATAGTATAAAAT	Spea_3170
Shewanella sediminis HAW-EB3
Position: -31 Score: 4.30936 Sequence: ACTGTATCCAAA Locus tag: Ssed_3503 Name: COG2423 Funciton: Predicted ornithine cyclodeaminase, mu-crystallin homolog
COG2423	-31	4.3	ACTGTATCCAAA	Ssed_3503
Shewanella woodyi ATCC 51908
Position: -33 Score: 4.49913 Sequence: TTGGTATACAAT Locus tag: Swoo_3726 Name: COG2423 Funciton: Predicted ornithine cyclodeaminase, mu-crystallin homolog
COG2423	-33	4.5	TTGGTATACAAT	Swoo_3726

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --