Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing pfaB gene

Properties
Regulog: FabR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Fatty acid biosynthesis
Effector: Unsaturated acyl-ACP; Unsaturated acyl-CoA
Phylum: Proteobacteria/gamma
Built upon 118 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella halifaxensis HAW-EB4
Position: -205
Score: 5.21146
Sequence: AGCTTACAAGTGTTCACC
Locus tag: Shal_3007
Name: pfaR
Funciton: transcriptional regulator for synthesis of eicosapentaenoic acid, PfaR
Locus tag: Shal_3008
Name: pfaA
Funciton: omega-3 polyunsaturated fatty acid synthase subunit, PfaA
Locus tag: Shal_3009
Name: pfaB
Funciton: omega-3 polyunsaturated fatty acid synthase subunit, PfaB
Locus tag: Shal_3010
Name: pfaC
Funciton: omega-3 polyunsaturated fatty acid synthase subunit, PfaC
Locus tag: Shal_3011
Name: pfaD
Funciton: Enoyl-[acyl-carrier-protein] reductase [FMN] (EC 1.3.1.9), inferred for PFA pathway
pfaR-pfaA-pfaB-pfaC-pfaD -205 5.2 AGCTTACAAGTGTTCACC Shal_3007
Shewanella loihica PV-4
Position: -194
Score: 5.85342
Sequence: AGCGAACATATGTAAGCT
Locus tag: Shew_2664
Name: pfaR
Funciton: transcriptional regulator for synthesis of eicosapentaenoic acid, PfaR
Locus tag: Shew_2665
Name: pfaA
Funciton: omega-3 polyunsaturated fatty acid synthase subunit, PfaA
Locus tag: Shew_2666
Name: pfaB
Funciton: omega-3 polyunsaturated fatty acid synthase subunit, PfaB
Locus tag: Shew_2667
Name: pfaC
Funciton: omega-3 polyunsaturated fatty acid synthase subunit, PfaC
Locus tag: Shew_2668
Name: pfaD
Funciton: Enoyl-[acyl-carrier-protein] reductase [FMN] (EC 1.3.1.9), inferred for PFA pathway
pfaR-pfaA-pfaB-pfaC-pfaD -194 5.9 AGCGAACATATGTAAGCT Shew_2664
Shewanella pealeana ATCC 700345
Position: -207
Score: 5.54045
Sequence: AGCTTACAAGTGTTCACT
Locus tag: Spea_2906
Name: pfaR
Funciton: transcriptional regulator for synthesis of eicosapentaenoic acid, PfaR
Locus tag: Spea_2907
Name: pfaA
Funciton: omega-3 polyunsaturated fatty acid synthase subunit, PfaA
Locus tag: Spea_2908
Name: pfaB
Funciton: omega-3 polyunsaturated fatty acid synthase subunit, PfaB
Locus tag: Spea_2909
Name: pfaC
Funciton: omega-3 polyunsaturated fatty acid synthase subunit, PfaC
Locus tag: Spea_2910
Name: pfaD
Funciton: Enoyl-[acyl-carrier-protein] reductase [FMN] (EC 1.3.1.9), inferred for PFA pathway
pfaR-pfaA-pfaB-pfaC-pfaD -207 5.5 AGCTTACAAGTGTTCACT Spea_2906
Shewanella piezotolerans WP3
Position: -207
Score: 5.41712
Sequence: AGCTTACATCTGTTCACT
Locus tag: swp_3549
Name: pfaR
Funciton: transcriptional regulator for synthesis of eicosapentaenoic acid, PfaR
Locus tag: swp_3550
Name: pfaA
Funciton: omega-3 polyunsaturated fatty acid synthase subunit, PfaA
Locus tag: swp_3551
Name: pfaB
Funciton: omega-3 polyunsaturated fatty acid synthase subunit, PfaB
Locus tag: swp_3553
Name: pfaC
Funciton: omega-3 polyunsaturated fatty acid synthase subunit, PfaC
pfaR-pfaA-pfaB-pfaC -207 5.4 AGCTTACATCTGTTCACT swp_3549
Shewanella sediminis HAW-EB3
Position: -206
Score: 5.73189
Sequence: AGAGTACAAGTGTAAGCT
Locus tag: Ssed_3201
Name: pfaR
Funciton: transcriptional regulator for synthesis of eicosapentaenoic acid, PfaR
Locus tag: Ssed_3202
Name: pfaA
Funciton: omega-3 polyunsaturated fatty acid synthase subunit, PfaA
Locus tag: Ssed_3203
Name: pfaB
Funciton: omega-3 polyunsaturated fatty acid synthase subunit, PfaB
Locus tag: Ssed_3204
Name: pfaC
Funciton: omega-3 polyunsaturated fatty acid synthase subunit, PfaC
Locus tag: Ssed_3205
Name: pfaD
Funciton: Enoyl-[acyl-carrier-protein] reductase [FMN] (EC 1.3.1.9), inferred for PFA pathway
pfaR-pfaA-pfaB-pfaC-pfaD -206 5.7 AGAGTACAAGTGTAAGCT Ssed_3201
Shewanella woodyi ATCC 51908
Position: -205
Score: 4.63158
Sequence: AATAAACACGTGTAAGCT
Locus tag: Swoo_1424
Name: pfaR
Funciton: transcriptional regulator for synthesis of eicosapentaenoic acid, PfaR
Locus tag: Swoo_1423
Name: pfaA
Funciton: omega-3 polyunsaturated fatty acid synthase subunit, PfaA
Locus tag: Swoo_1422
Name: pfaB
Funciton: omega-3 polyunsaturated fatty acid synthase subunit, PfaB
Locus tag: Swoo_1421
Name: pfaC
Funciton: omega-3 polyunsaturated fatty acid synthase subunit, PfaC
pfaR-pfaA-pfaB-pfaC -205 4.6 AATAAACACGTGTAAGCT Swoo_1424