Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing lcfE gene

Properties
Regulog: FabR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Fatty acid biosynthesis
Effector: Unsaturated acyl-ACP; Unsaturated acyl-CoA
Phylum: Proteobacteria/gamma
Built upon 118 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -59
Score: 4.62424
Sequence: GAGGAACACTTGTAAGCT
Locus tag: Sama_3571
Name: lcfE
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
lcfE -59 4.6 GAGGAACACTTGTAAGCT Sama_3571
Shewanella baltica OS155
Position: -34
Score: 4.81568
Sequence: GCGGTACACTTGTAAGCT
Locus tag: Sbal_4274
Name: lcfE
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
lcfE -34 4.8 GCGGTACACTTGTAAGCT Sbal_4274
Shewanella denitrificans OS217
Position: -32
Score: 4.57285
Sequence: CAGGTACAAGTGTAAGCT
Locus tag: Sden_0072
Name: lcfE
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
lcfE -32 4.6 CAGGTACAAGTGTAAGCT Sden_0072
Shewanella frigidimarina NCIMB 400
Position: -34
Score: 4.62424
Sequence: GCGGAACACTTGTAAGCT
Locus tag: Sfri_3973
Name: lcfE
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
lcfE -34 4.6 GCGGAACACTTGTAAGCT Sfri_3973
Shewanella halifaxensis HAW-EB4
Position: -34
Score: 4.62424
Sequence: GCGGAACACTTGTAAGCT
Locus tag: Shal_0063
Name: lcfE
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
lcfE -34 4.6 GCGGAACACTTGTAAGCT Shal_0063
Shewanella loihica PV-4
Position: -35
Score: 4.67113
Sequence: CAGGTACAAGTGTACGCT
Locus tag: Shew_3776
Name: lcfE
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
lcfE -35 4.7 CAGGTACAAGTGTACGCT Shew_3776
Shewanella oneidensis MR-1
Position: -121
Score: 4.81568
Sequence: GCGGTACACTTGTAAGCT
Locus tag: SO_0075
Name: lcfE
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
lcfE -121 4.8 GCGGTACACTTGTAAGCT SO_0075
Shewanella pealeana ATCC 700345
Position: -34
Score: 4.62424
Sequence: GCGGAACACTTGTAAGCT
Locus tag: Spea_4186
Name: lcfE
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
lcfE -34 4.6 GCGGAACACTTGTAAGCT Spea_4186
Shewanella piezotolerans WP3
Position: -121
Score: 4.62424
Sequence: GCGGAACACTTGTAAGCT
Locus tag: swp_0114
Name: lcfE
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
lcfE -121 4.6 GCGGAACACTTGTAAGCT swp_0114
Shewanella putrefaciens CN-32
Position: -35
Score: 4.81568
Sequence: GCGGTACACTTGTAAGCT
Locus tag: Sputcn32_0061
Name: lcfE
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
lcfE -35 4.8 GCGGTACACTTGTAAGCT Sputcn32_0061
Shewanella sediminis HAW-EB3
Position: -34
Score: 4.83634
Sequence: GAGGAACACCTGTACGCT
Locus tag: Ssed_4459
Name: lcfE
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
lcfE -34 4.8 GAGGAACACCTGTACGCT Ssed_4459
Shewanella sp ANA-3
Position: -34
Score: 4.81568
Sequence: GCGGTACACTTGTAAGCT
Locus tag: Shewana3_0080
Name: lcfE
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
lcfE -34 4.8 GCGGTACACTTGTAAGCT Shewana3_0080
Shewanella sp MR-4
Position: -34
Score: 4.81568
Sequence: GCGGTACACTTGTAAGCT
Locus tag: Shewmr4_0078
Name: lcfE
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
lcfE -34 4.8 GCGGTACACTTGTAAGCT Shewmr4_0078
Shewanella sp MR-7
Position: -34
Score: 4.81568
Sequence: GCGGTACACTTGTAAGCT
Locus tag: Shewmr7_0076
Name: lcfE
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
lcfE -34 4.8 GCGGTACACTTGTAAGCT Shewmr7_0076
Shewanella sp W3-18-1
Position: -35
Score: 4.81568
Sequence: GCGGTACACTTGTAAGCT
Locus tag: Sputw3181_4017
Name: lcfE
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
lcfE -35 4.8 GCGGTACACTTGTAAGCT Sputw3181_4017
Shewanella woodyi ATCC 51908
Position: -34
Score: 5.02777
Sequence: GAGGTACACCTGTACGCT
Locus tag: Swoo_4860
Name: lcfE
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
lcfE -34 5 GAGGTACACCTGTACGCT Swoo_4860
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