Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing glnD gene

Properties
Regulog: NifA-1 - Desulfovibrionales
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode:
Biological process: Nitrogen assimilation
Effector:
Phylum: Proteobacteria/delta
Built upon 101 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Desulfohalobium retbaense DSM 5692
Position: -173
Score: 3.92457
Sequence: GTAACAAATTTGTCCA
Position: -132
Score: 4.18537
Sequence: ATGCCATTTTTGACAA
Locus tag: Dret_2267
Name: amtB
Funciton: Ammonium transporter
Locus tag: Dret_2268
Name: glnB
Funciton: Nitrogen regulatory protein P-II
Locus tag: Dret_2269
Name: glnD
Funciton: UTP-GlnB uridylyltransferase, GlnD
amtB-glnB-glnD -173 3.9 GTAACAAATTTGTCCA Dret_2267
-132 4.2 ATGCCATTTTTGACAA
Desulfomicrobium baculatum DSM 4028
Position: -387
Score: 4.54763
Sequence: TTTTCAATTTTGGAAG
Locus tag: Dbac_3048
Name: amtB
Funciton: Ammonium transporter
Locus tag: Dbac_3047
Name: glnB
Funciton: Nitrogen regulatory protein P-II
Locus tag: Dbac_3046
Name: glnD
Funciton: UTP-GlnB uridylyltransferase, GlnD
amtB-glnB-glnD -387 4.5 TTTTCAATTTTGGAAG Dbac_3048
Desulfovibrio desulfuricans G20
Position: -207
Score: 3.69323
Sequence: TTAACAAAATTGTGTT
Position: -175
Score: 4.29967
Sequence: ATAACAAATATGTATA
Locus tag: Dde_2311
Name: amtB
Funciton: Ammonium transporter
Locus tag: Dde_2310
Name: glnB
Funciton: Nitrogen regulatory protein P-II
Locus tag: Dde_2309
Name: glnD
Funciton: UTP-GlnB uridylyltransferase, GlnD
amtB-glnB-glnD -207 3.7 TTAACAAAATTGTGTT Dde_2311
-175 4.3 ATAACAAATATGTATA
Desulfovibrio magneticus RS-1
Position: -158
Score: 4.445
Sequence: GTTGCAAAAATGTCAA
Locus tag: DMR_34890
Name: amtB
Funciton: Ammonium transporter
Locus tag: DMR_34880
Name: glnB
Funciton: Nitrogen regulatory protein P-II
Locus tag: DMR_34870
Name: glnD
Funciton: UTP-GlnB uridylyltransferase, GlnD
amtB-glnB-glnD -158 4.4 GTTGCAAAAATGTCAA DMR_34890
Desulfovibrio salexigens DSM 2638
Position: -204
Score: 4.00616
Sequence: TTTCCAATTATGTTTT
Position: -153
Score: 3.97661
Sequence: TTTTCAGTTTTGGCAC
Position: -91
Score: 3.7259
Sequence: TGTCTAAAATTGTAAA
Position: -50
Score: 4.01608
Sequence: GAGACGAAATTGTAAA
Locus tag: Desal_3438
Name: amtB
Funciton: Ammonium transporter
Locus tag: Desal_3437
Name: glnB
Funciton: Nitrogen regulatory protein P-II
Locus tag: Desal_3436
Name: glnD
Funciton: UTP-GlnB uridylyltransferase, GlnD
amtB-glnB-glnD -204 4 TTTCCAATTATGTTTT Desal_3438
-153 4 TTTTCAGTTTTGGCAC
-91 3.7 TGTCTAAAATTGTAAA
-50 4 GAGACGAAATTGTAAA
Desulfovibrio vulgaris Hildenborough
Position: -159
Score: 3.85821
Sequence: ACGACAAAAATGCAAA
Locus tag: DVU1231
Name: amtB
Funciton: Ammonium transporter
Locus tag: DVU1232
Name: glnB
Funciton: Nitrogen regulatory protein P-II
Locus tag: DVU1233
Name: glnD
Funciton: UTP-GlnB uridylyltransferase, GlnD
amtB-glnB-glnD -159 3.9 ACGACAAAAATGCAAA DVU1231
Desulfovibrio vulgaris str. Miyazaki F
Position: -208
Score: 4.10153
Sequence: TTTACAAAAAAGAAAC
Position: -176
Score: 4.2782
Sequence: GTTACCAAAATGGAAA
Position: -175
Score: 3.90348
Sequence: TTACCAAAATGGAAAA
Locus tag: DvMF_0866
Name: amtB
Funciton: Ammonium transporter
Locus tag: DvMF_0865
Name: glnB
Funciton: Nitrogen regulatory protein P-II
Locus tag: DvMF_0864
Name: glnD
Funciton: UTP-GlnB uridylyltransferase, GlnD
amtB-glnB-glnD -208 4.1 TTTACAAAAAAGAAAC DvMF_0866
-176 4.3 GTTACCAAAATGGAAA
-175 3.9 TTACCAAAATGGAAAA