Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ompW gene

Properties
Regulog: NarP - Shewanellaceae
Regulator type: Transcription factor
Regulator family: LuxR
Regulation mode: activator (repressor)
Biological process: Nitrate and nitrite respiration
Effector: Nitrite; Nitrate
Phylum: Proteobacteria
Built upon 249 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -134
Score: 4.51998
Sequence: TACCCCAAAGTGGGTA
Locus tag: Sama_1371
Name: ompW
Funciton: Outer membrane protein W precursor
ompW -134 4.5 TACCCCAAAGTGGGTA Sama_1371
Shewanella baltica OS155
Position: -132
Score: 4.51357
Sequence: TACCTATAAGTGAGTA
Locus tag: Sbal_1490
Name: ompW
Funciton: Outer membrane protein W precursor
ompW -132 4.5 TACCTATAAGTGAGTA Sbal_1490
Shewanella frigidimarina NCIMB 400
Position: -132
Score: 4.95183
Sequence: TACCTCTATAGTAGTA
Locus tag: Sfri_1334
Name: ompW
Funciton: Outer membrane protein W precursor
ompW -132 5 TACCTCTATAGTAGTA Sfri_1334
Shewanella oneidensis MR-1
Position: -135
Score: 4.55287
Sequence: TACCTAAAAATAAGTA
Locus tag: SO1673
Name: ompW
Funciton: Outer membrane protein W precursor
ompW -135 4.6 TACCTAAAAATAAGTA SO1673
Shewanella pealeana ATCC 700345
Position: -133
Score: 3.90309
Sequence: TATCTCGAAGTGGGTA
Locus tag: Spea_2787
Name: ompW
Funciton: Outer membrane protein W precursor
ompW -133 3.9 TATCTCGAAGTGGGTA Spea_2787
Shewanella piezotolerans WP3
Position: -136
Score: 4.64397
Sequence: TATCTCTAAATGGGTA
Locus tag: swp_3395
Name: ompW
Funciton: Outer membrane protein W precursor
ompW -136 4.6 TATCTCTAAATGGGTA swp_3395
Shewanella putrefaciens CN-32
Position: -242
Score: 4.10575
Sequence: TAACCCTTACTAGGTG
Position: -132
Score: 4.6008
Sequence: TACCTATAAGTGGGTA
Locus tag: Sputcn32_1392
Name: ompW
Funciton: Outer membrane protein W precursor
ompW -242 4.1 TAACCCTTACTAGGTG Sputcn32_1392
-132 4.6 TACCTATAAGTGGGTA
Shewanella sediminis HAW-EB3
Position: -133
Score: 4.01818
Sequence: TATCTATAACTGGGTA
Locus tag: Ssed_1469
Name: ompW
Funciton: Outer membrane protein W precursor
ompW -133 4 TATCTATAACTGGGTA Ssed_1469
Shewanella sp ANA-3
Position: -132
Score: 4.81757
Sequence: TACCTCAAAATAAGTA
Locus tag: Shewana3_2775
Name: ompW
Funciton: Outer membrane protein W precursor
ompW -132 4.8 TACCTCAAAATAAGTA Shewana3_2775
Shewanella sp MR-4
Position: -132
Score: 4.81757
Sequence: TACCTCAAAATAAGTA
Locus tag: Shewmr4_2601
Name: ompW
Funciton: Outer membrane protein W precursor
ompW -132 4.8 TACCTCAAAATAAGTA Shewmr4_2601
Shewanella sp MR-7
Position: -132
Score: 4.81757
Sequence: TACCTCAAAATAAGTA
Locus tag: Shewmr7_2668
Name: ompW
Funciton: Outer membrane protein W precursor
ompW -132 4.8 TACCTCAAAATAAGTA Shewmr7_2668
Shewanella sp W3-18-1
Position: -242
Score: 4.24723
Sequence: TAACCCTTATTAGGTG
Position: -132
Score: 4.6008
Sequence: TACCTATAAGTGGGTA
Locus tag: Sputw3181_2709
Name: ompW
Funciton: Outer membrane protein W precursor
ompW -242 4.2 TAACCCTTATTAGGTG Sputw3181_2709
-132 4.6 TACCTATAAGTGGGTA
Shewanella woodyi ATCC 51908
Position: -133
Score: 4.13865
Sequence: TATCTATAAGTGGGTA
Locus tag: Swoo_3207
Name: ompW
Funciton: Outer membrane protein W precursor
ompW -133 4.1 TATCTATAAGTGGGTA Swoo_3207
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