Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing paaD gene

Properties
Regulog: PaaR - Ralstonia
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Phenylacetic acid degradation
Effector: Phenylacetyl-CoA
Phylum: Betaproteobacteria
Built upon 18 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Cupriavidus taiwanensis
Position: -83
Score: 6.22724
Sequence: ATTGACCGACCGGTCGGCTTAT
Locus tag: RALTA_A2973
Name: paaA
Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: RALTA_A2974
Name: paaB
Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: RALTA_A2975
Name: paaC
Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: RALTA_A2976
Name: paaD
Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: RALTA_A2977
Name: paaE
Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
Locus tag: RALTA_A2978
Name: paaW
Funciton: Protein of unknown function DUF3658/DUF1835
Locus tag: RALTA_A2979
Name: paaR
Funciton: Transcriptional regulator of phenylacetic acid degradation, TetR family
paaA-paaB-paaC-paaD-paaE-paaW-paaR -83 6.2 ATTGACCGACCGGTCGGCTTAT RALTA_A2973
Ralstonia eutropha H16
Position: -79
Score: 5.73852
Sequence: ATTGACCGACCGGTCGGCATAT
Locus tag: H16_A3520
Name: paaA
Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: H16_A3521
Name: paaB
Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: H16_A3522
Name: paaC
Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: H16_A3523
Name: paaD
Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: H16_A3524
Name: paaE
Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
Locus tag: H16_A3525
Name: paaW
Funciton: Protein of unknown function DUF3658/DUF1835
Locus tag: H16_A3526
Name: paaR
Funciton: Transcriptional regulator of phenylacetic acid degradation, TetR family
paaA-paaB-paaC-paaD-paaE-paaW-paaR -79 5.7 ATTGACCGACCGGTCGGCATAT H16_A3520
Ralstonia eutropha JMP134
Position: -95
Score: 6.22724
Sequence: ATTGACCGACCGGTCGGCTTAT
Locus tag: Reut_A3206
Name: paaA
Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: Reut_A3207
Name: paaB
Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: Reut_A3208
Name: paaC
Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: Reut_A3209
Name: paaD
Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: Reut_A3210
Name: paaE
Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
Locus tag: Reut_A3211
Name: paaW
Funciton: Protein of unknown function DUF3658/DUF1835
Locus tag: Reut_A3212
Name: paaR
Funciton: Transcriptional regulator of phenylacetic acid degradation, TetR family
paaA-paaB-paaC-paaD-paaE-paaW-paaR -95 6.2 ATTGACCGACCGGTCGGCTTAT Reut_A3206
Ralstonia metallidurans CH34
Position: -113
Score: 6.76152
Sequence: ATTGACCGACCGGTCGGTTTAT
Locus tag: Rmet_3369
Name: paaA
Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: Rmet_3370
Name: paaB
Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: Rmet_3371
Name: paaC
Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: Rmet_3372
Name: paaD
Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: Rmet_3373
Name: paaE
Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
Locus tag: Rmet_3374
Name: paaW
Funciton: Protein of unknown function DUF3658/DUF1835
Locus tag: Rmet_3375
Name: paaR
Funciton: Transcriptional regulator of phenylacetic acid degradation, TetR family
paaA-paaB-paaC-paaD-paaE-paaW-paaR -113 6.8 ATTGACCGACCGGTCGGTTTAT Rmet_3369
Ralstonia pickettii 12J
Position: -96
Score: 6.34603
Sequence: ATTGACCGACCGGTCGGACGGT
Locus tag: Rpic_4567
Name: paaA
Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: Rpic_4566
Name: paaB
Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: Rpic_4565
Name: paaC
Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: Rpic_4564
Name: paaD
Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: Rpic_4563
Name: paaE
Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
paaA-paaB-paaC-paaD-paaE -96 6.3 ATTGACCGACCGGTCGGACGGT Rpic_4567
Ralstonia solanacearum GMI1000
Position: -97
Score: 6.30204
Sequence: ATTGACCGACCGGTCGGACGAT
Locus tag: RSp0604
Name: paaA
Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: RSp0605
Name: paaB
Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: RSp0606
Name: paaC
Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: RSp0607
Name: paaD
Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: RSp0608
Name: paaE
Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
paaA-paaB-paaC-paaD-paaE -97 6.3 ATTGACCGACCGGTCGGACGAT RSp0604