Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing paaW gene

Properties
Regulog: PaaR - Burkholderia
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Phenylacetic acid degradation
Effector: Phenylacetyl-CoA
Phylum: Betaproteobacteria
Built upon 27 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Burkholderia cepacia AMMD
Position: -62
Score: 7.10894
Sequence: ATTAACCGACCGGTCGGTTGGT
Locus tag: Bamb_0249
Name: paaA
Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: Bamb_0248
Name: paaB
Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: Bamb_0247
Name: paaC
Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: Bamb_0246
Name: paaD
Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: Bamb_0245
Name: paaE
Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
Locus tag: Bamb_0244
Name: paaW
Funciton: Protein of unknown function DUF3658/DUF1835
Locus tag: Bamb_0243
Name: paaR
Funciton: Transcriptional regulator of phenylacetic acid degradation, TetR family
paaA-paaB-paaC-paaD-paaE-paaW-paaR -62 7.1 ATTAACCGACCGGTCGGTTGGT Bamb_0249
Burkholderia glumae BGR1
Position: -62
Score: 6.77945
Sequence: ATTAACCGACCGGACGGTTGGT
Locus tag: bglu_1g02410
Name: paaA
Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: bglu_1g02400
Name: paaB
Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: bglu_1g02390
Name: paaC
Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: bglu_1g02380
Name: paaD
Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: bglu_1g02370
Name: paaE
Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
Locus tag: bglu_1g02360
Name: paaW
Funciton: Protein of unknown function DUF3658/DUF1835
Locus tag: bglu_1g02350
Name: paaR
Funciton: Transcriptional regulator of phenylacetic acid degradation, TetR family
paaA-paaB-paaC-paaD-paaE-paaW-paaR -62 6.8 ATTAACCGACCGGACGGTTGGT bglu_1g02410
Burkholderia mallei ATCC 23344
Position: -62
Score: 7.10894
Sequence: ATTAACCGACCGGTCGGTTGGT
Locus tag: BMA2573
Name: paaA
Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: BMA2574
Name: paaB
Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: BMA2575
Name: paaC
Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: BMA2576
Name: paaD
Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: BMA2577
Name: paaE
Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
Locus tag: BMA2578
Name: paaW
Funciton: Protein of unknown function DUF3658/DUF1835
Locus tag: BMA2579
Name: paaR
Funciton: Transcriptional regulator of phenylacetic acid degradation, TetR family
paaA-paaB-paaC-paaD-paaE-paaW-paaR -62 7.1 ATTAACCGACCGGTCGGTTGGT BMA2573
Burkholderia phymatum STM815
Position: -66
Score: 6.77945
Sequence: ATTAACCGACCGGACGGTTGGT
Locus tag: Bphy_2857
Name: paaA
Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: Bphy_2858
Name: paaB
Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: Bphy_2859
Name: paaC
Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: Bphy_2860
Name: paaD
Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: Bphy_2861
Name: paaE
Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
Locus tag: Bphy_2862
Name: paaW
Funciton: Protein of unknown function DUF3658/DUF1835
Locus tag: Bphy_2863
Name: paaR
Funciton: Transcriptional regulator of phenylacetic acid degradation, TetR family
paaA-paaB-paaC-paaD-paaE-paaW-paaR -66 6.8 ATTAACCGACCGGACGGTTGGT Bphy_2857
Burkholderia pseudomallei K96243
Position: -62
Score: 7.10894
Sequence: ATTAACCGACCGGTCGGTTGGT
Locus tag: BPSL3230
Name: paaA
Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: BPSL3231
Name: paaB
Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: BPSL3232
Name: paaC
Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: BPSL3233
Name: paaD
Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: BPSL3234
Name: paaE
Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
Locus tag: BPSL3235
Name: paaW
Funciton: Protein of unknown function DUF3658/DUF1835
Locus tag: BPSL3236
Name: paaR
Funciton: Transcriptional regulator of phenylacetic acid degradation, TetR family
paaA-paaB-paaC-paaD-paaE-paaW-paaR -62 7.1 ATTAACCGACCGGTCGGTTGGT BPSL3230
Burkholderia sp. 383
Position: -61
Score: 7.10894
Sequence: ATTAACCGACCGGTCGGTTGGT
Locus tag: Bcep18194_A3429
Name: paaA
Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: Bcep18194_A3428
Name: paaB
Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: Bcep18194_A3427
Name: paaC
Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: Bcep18194_A3426
Name: paaD
Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: Bcep18194_A3425
Name: paaE
Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
Locus tag: Bcep18194_A3424
Name: paaW
Funciton: Protein of unknown function DUF3658/DUF1835
Locus tag: Bcep18194_A3423
Name: paaR
Funciton: Transcriptional regulator of phenylacetic acid degradation, TetR family
paaA-paaB-paaC-paaD-paaE-paaW-paaR -61 7.1 ATTAACCGACCGGTCGGTTGGT Bcep18194_A3429
Burkholderia vietnamiensis G4
Position: -62
Score: 7.10894
Sequence: ATTAACCGACCGGTCGGTTGGT
Locus tag: Bcep1808_0312
Name: paaA
Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: Bcep1808_0311
Name: paaB
Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: Bcep1808_0310
Name: paaC
Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: Bcep1808_0309
Name: paaD
Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: Bcep1808_0308
Name: paaE
Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
Locus tag: Bcep1808_0307
Name: paaW
Funciton: Protein of unknown function DUF3658/DUF1835
Locus tag: Bcep1808_0306
Name: paaR
Funciton: Transcriptional regulator of phenylacetic acid degradation, TetR family
paaA-paaB-paaC-paaD-paaE-paaW-paaR -62 7.1 ATTAACCGACCGGTCGGTTGGT Bcep1808_0312
Burkholderia xenovorans LB400
Position: -65
Score: 7.10894
Sequence: ATTAACCGACCGGTCGGTTGGT
Locus tag: Bxe_A0295
Name: paaA
Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: Bxe_A0294
Name: paaB
Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: Bxe_A0293
Name: paaC
Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: Bxe_A0292
Name: paaD
Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: Bxe_A0291
Name: paaE
Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
Locus tag: Bxe_A0290
Name: paaW
Funciton: Protein of unknown function DUF3658/DUF1835
Locus tag: Bxe_A0289
Name: paaR
Funciton: Transcriptional regulator of phenylacetic acid degradation, TetR family
paaA-paaB-paaC-paaD-paaE-paaW-paaR -65 7.1 ATTAACCGACCGGTCGGTTGGT Bxe_A0295
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