Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing vanB gene

Properties
Regulog: VanR - Pseudomonadaceae
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Vanillate utilization
Effector: Vanillate
Phylum: Proteobacteria
Built upon 13 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Pseudomonas aeruginosa PAO1
Position: -222
Score: 5.37299
Sequence: ATTGGATCCATT
Position: -38
Score: 5.51815
Sequence: ATTGGATCCAAT
Position: -13
Score: 3.45211
Sequence: AGAGGATCCGAC
Locus tag: PA4904
Name: vanA
Funciton: Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82)
Locus tag: PA4905
Name: vanB
Funciton: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Vanillate O-demethylase oxidoreductase (EC 1.14.13.-)
vanA-vanB -222 5.4 ATTGGATCCATT PA4904
-38 5.5 ATTGGATCCAAT
-13 3.5 AGAGGATCCGAC
Pseudomonas fluorescens Pf-5
Position: -150
Score: 5.04234
Sequence: AATGGATCCATA
Position: -128
Score: 4.71496
Sequence: ACTGGATCCAAA
Position: -44
Score: 5.26691
Sequence: AATGGATCCATT
Locus tag: PFL_3471
Name: vanA
Funciton: Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82)
Locus tag: PFL_3472
Name: vanB
Funciton: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Vanillate O-demethylase oxidoreductase (EC 1.14.13.-)
vanA-vanB -150 5 AATGGATCCATA PFL_3471
-128 4.7 ACTGGATCCAAA
-44 5.3 AATGGATCCATT
Pseudomonas putida KT2440
Position: -126
Score: 4.79437
Sequence: AATGGATCCACT
Position: -41
Score: 5.26691
Sequence: AATGGATCCATT
Locus tag: PP3736
Name: vanA
Funciton: Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82)
Locus tag: PP3737
Name: vanB
Funciton: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Vanillate O-demethylase oxidoreductase (EC 1.14.13.-)
vanA-vanB -126 4.8 AATGGATCCACT PP3736
-41 5.3 AATGGATCCATT
Pseudomonas syringae pv. tomato str. DC3000
Position: -138
Score: 4.61577
Sequence: CATGGATCCATT
Position: -42
Score: 4.58324
Sequence: TGTGGATCCATA
Locus tag: PSPTO2904
Name: vanA
Funciton: Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82)
Locus tag: PSPTO2905
Name: vanB
Funciton: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Vanillate O-demethylase oxidoreductase (EC 1.14.13.-)
vanA-vanB -138 4.6 CATGGATCCATT PSPTO2904
-42 4.6 TGTGGATCCATA