Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing deoD gene

Properties
Regulog: RutR - Rhizobiales
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Pyrimidine utilization
Effector: Uracil
Phylum: Proteobacteria/alpha
Built upon 44 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Agrobacterium tumefaciens str. C58 (Cereon)
Position: -164
Score: 4.66015
Sequence: GTTTTTCCACCGGGTCAAAA
Locus tag: Atu0126
Name: pntD
Funciton: Predicted nucleoside ABC transporter, substrate-binding protein
Locus tag: Atu0127
Name: pntA
Funciton: Predicted nucleoside ABC transporter, ATP-binding protein
Locus tag: Atu0128
Name: pntB
Funciton: Predicted nucleoside ABC transporter, permease protein 1
Locus tag: Atu0129
Name: pntC
Funciton: Predicted nucleoside ABC transporter, permease protein 2
Locus tag: Atu0130
Name: cdd
Funciton: Cytidine deaminase (EC 3.5.4.5)
Locus tag: Atu0131
Name: deoD
Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1)
Locus tag: Atu0132
Name: deoC
Funciton: Deoxyribose-phosphate aldolase (EC 4.1.2.4)
Locus tag: Atu0133
Name: deoA
Funciton: Thymidine phosphorylase (EC 2.4.2.4)
pntD-pntA-pntB-pntC-cdd-deoD-deoC-deoA -164 4.7 GTTTTTCCACCGGGTCAAAA Atu0126
Mesorhizobium loti MAFF303099
Position: -41
Score: 5.57618
Sequence: TTTTGACCAAGCGATAAAAA
Locus tag: mlr3154
Name: pntA
Funciton: Predicted nucleoside ABC transporter, ATP-binding protein
Locus tag: mlr3155
Name: pntB
Funciton: Predicted nucleoside ABC transporter, permease protein 1
Locus tag: mlr3157
Name: pntC
Funciton: Predicted nucleoside ABC transporter, permease protein 2
Locus tag: mlr3158
Name: cdd
Funciton: Cytidine deaminase (EC 3.5.4.5)
Locus tag: mlr3159
Name: deoD
Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1)
Locus tag: mlr3160
Name: deoA
Funciton: Thymidine phosphorylase (EC 2.4.2.4)
pntA-pntB-pntC-cdd-deoD-deoA -41 5.6 TTTTGACCAAGCGATAAAAA mlr3154
Mesorhizobium sp. BNC1
Position: -18
Score: 5.26567
Sequence: TGTTGACCAAAAGATAAAAT
Locus tag: Meso_3652
Name: pntA
Funciton: Predicted nucleoside ABC transporter, ATP-binding protein
Locus tag: Meso_3653
Name: pntB
Funciton: Predicted nucleoside ABC transporter, permease protein 1
Locus tag: Meso_3654
Name: pntC
Funciton: Predicted nucleoside ABC transporter, permease protein 2
Locus tag: Meso_3655
Name: cdd
Funciton: Cytidine deaminase (EC 3.5.4.5)
Locus tag: Meso_3656
Name: deoD
Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1)
Locus tag: Meso_3657
Name: deoA
Funciton: Thymidine phosphorylase (EC 2.4.2.4)
pntA-pntB-pntC-cdd-deoD-deoA -18 5.3 TGTTGACCAAAAGATAAAAT Meso_3652
Rhizobium etli CFN 42
Position: -154
Score: 4.84007
Sequence: TCTTTACCGCCTGAAAAATT
Locus tag: RHE_CH00187
Name: pntD
Funciton: Predicted nucleoside ABC transporter, substrate-binding protein
Locus tag: RHE_CH00188
Name: pntA
Funciton: Predicted nucleoside ABC transporter, ATP-binding protein
Locus tag: RHE_CH00189
Name: pntB
Funciton: Predicted nucleoside ABC transporter, permease protein 1
Locus tag: RHE_CH00190
Name: pntC
Funciton: Predicted nucleoside ABC transporter, permease protein 2
Locus tag: RHE_CH00191
Name: cdd
Funciton: Cytidine deaminase (EC 3.5.4.5)
Locus tag: RHE_CH00192
Name: deoD
Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1)
Locus tag: RHE_CH00193
Name: deoC
Funciton: Deoxyribose-phosphate aldolase (EC 4.1.2.4)
Locus tag: RHE_CH00194
Name: deoA
Funciton: Thymidine phosphorylase (EC 2.4.2.4)
pntD-pntA-pntB-pntC-cdd-deoD-deoC-deoA -154 4.8 TCTTTACCGCCTGAAAAATT RHE_CH00187
Rhizobium leguminosarum bv. viciae 3841
Position: -155
Score: 5.11548
Sequence: TCTTTACCAGCTGAAAAATT
Locus tag: RL0196
Name: pntD
Funciton: Predicted nucleoside ABC transporter, substrate-binding protein
Locus tag: RL0197
Name: pntA
Funciton: Predicted nucleoside ABC transporter, ATP-binding protein
Locus tag: RL0198
Name: pntB
Funciton: Predicted nucleoside ABC transporter, permease protein 1
Locus tag: RL0199
Name: pntC
Funciton: Predicted nucleoside ABC transporter, permease protein 2
Locus tag: RL0200
Name: cdd
Funciton: Cytidine deaminase (EC 3.5.4.5)
Locus tag: RL0201
Name: deoD
Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1)
Locus tag: RL0202
Name: deoC
Funciton: Deoxyribose-phosphate aldolase (EC 4.1.2.4)
Locus tag: RL0203
Name: deoA
Funciton: Thymidine phosphorylase (EC 2.4.2.4)
pntD-pntA-pntB-pntC-cdd-deoD-deoC-deoA -155 5.1 TCTTTACCAGCTGAAAAATT RL0196
Rhizobium sp. NGR234
Position: -78
Score: 5.2582
Sequence: CTTATACCAAATGGTAAAAA
Locus tag: NGR_c34500
Name: pntA
Funciton: Predicted nucleoside ABC transporter, ATP-binding protein
Locus tag: NGR_c34510
Name: pntB
Funciton: Predicted nucleoside ABC transporter, permease protein 1
Locus tag: NGR_c34520
Name: pntC
Funciton: Predicted nucleoside ABC transporter, permease protein 2
Locus tag: NGR_c34530
Name: cdd
Funciton: Cytidine deaminase (EC 3.5.4.5)
Locus tag: NGR_c34540
Name: deoD
Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1)
Locus tag: NGR_c34550
Name: deoA
Funciton: Thymidine phosphorylase (EC 2.4.2.4)
pntA-pntB-pntC-cdd-deoD-deoA -78 5.3 CTTATACCAAATGGTAAAAA NGR_c34500
Sinorhizobium meliloti 1021
Position: -80
Score: 5.2582
Sequence: CTTATACCAAATGGTAAAAA
Locus tag: SMc04127
Name: pntA
Funciton: Predicted nucleoside ABC transporter, ATP-binding protein
Locus tag: SMc04126
Name: pntB
Funciton: Predicted nucleoside ABC transporter, permease protein 1
Locus tag: SMc04125
Name: pntC
Funciton: Predicted nucleoside ABC transporter, permease protein 2
Locus tag: SMc04124
Name: cdd
Funciton: Cytidine deaminase (EC 3.5.4.5)
Locus tag: SMc04123
Name: deoD
Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1)
Locus tag: SMc04122
Name: deoA
Funciton: Thymidine phosphorylase (EC 2.4.2.4)
pntA-pntB-pntC-cdd-deoD-deoA -80 5.3 CTTATACCAAATGGTAAAAA SMc04127
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