Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing xdhB gene

Properties
Regulog: RutR - Oceanospirillales/Alteromonadales
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Pyrimidine utilization
Effector: Uracil
Phylum: Proteobacteria/gamma
Built upon 32 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Cellvibrio japonicus Ueda107
Position: -201
Score: 4.84897
Sequence: ACCTGACTGCACGGACAAAA
Position: -77
Score: 4.16204
Sequence: AATTGTCTATTTGGCCAGTC
Locus tag: CJA_0546
Name: xdhA
Funciton: Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A (1.17.1.4)
Locus tag: CJA_0547
Name: xdhB
Funciton: Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4)
Locus tag: CJA_0548
Name: xdhC
Funciton: XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase)
Locus tag: CJA_0549
Name: pucL
Funciton: Uricase (EC 1.7.3.3)
Locus tag: CJA_0550
Name: pucM
Funciton: Hydroxyisourate hydrolase (EC 3.5.2.17)
Locus tag: CJA_0551
Name: guaD
Funciton: Guanine deaminase (EC 3.5.4.3)
Locus tag: CJA_0552
Name: COG3748
Funciton: Predicted inner membrane protein
xdhA-xdhB-xdhC-pucL-pucM-guaD-COG3748 -201 4.8 ACCTGACTGCACGGACAAAA CJA_0546
-77 4.2 AATTGTCTATTTGGCCAGTC
Chromohalobacter salexigens DSM 3043
Position: -75
Score: 4.98954
Sequence: AGTTGACCAGATGGTCATAC
Locus tag: Csal_1789
Name: xdhA
Funciton: Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A (1.17.1.4)
Locus tag: Csal_1788
Name: xdhB
Funciton: Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4)
Locus tag: Csal_1787
Name: xdhC
Funciton: XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase)
xdhA-xdhB-xdhC -75 5 AGTTGACCAGATGGTCATAC Csal_1789
Hahella chejuensis KCTC 2396
Position: -157
Score: 5.22625
Sequence: ACCTGACCATGTAGACAAGT
Locus tag: HCH_01099
Name: xdhA
Funciton: Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A (1.17.1.4)
Locus tag: HCH_01098
Name: xdhB
Funciton: Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4)
Locus tag: HCH_01097
Name: xdhC
Funciton: XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase)
Locus tag: HCH_01096
Name: allB
Funciton: Allantoinase (EC 3.5.2.5)
Locus tag: HCH_01095
Name: allC
Funciton: Allantoicase (EC 3.5.3.4)
Locus tag: HCH_01094
Name: pucL
Funciton: Uricase (EC 1.7.3.3)
Locus tag: HCH_01093
Name: pucM
Funciton: Hydroxyisourate hydrolase (EC 3.5.2.17)
Locus tag: HCH_01092
Name: allA
Funciton: Ureidoglycolate hydrolase (EC 3.5.3.19)
Locus tag: HCH_01091
Name: guaD
Funciton: Guanine deaminase (EC 3.5.4.3)
Locus tag: HCH_01090
Name: COG3748
Funciton: Predicted inner membrane protein
xdhA-xdhB-xdhC-allB-allC-pucL-pucM-allA-guaD-COG3748 -157 5.2 ACCTGACCATGTAGACAAGT HCH_01099
Marinobacter sp. ELB17
Position: -196
Score: 5.22433
Sequence: ACTAGACTATTTGGTCAGGT
Locus tag: MELB17_16808
Name: xdhA
Funciton: Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A (1.17.1.4)
Locus tag: MELB17_16813
Name: xdhB
Funciton: Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4)
Locus tag: MELB17_16818
Name: xdhC
Funciton: XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase)
xdhA-xdhB-xdhC -196 5.2 ACTAGACTATTTGGTCAGGT MELB17_16808
Marinomonas sp. MWYL1
Position: -83
Score: 4.96178
Sequence: ATTTGTACGATTGGTCAGGT
Locus tag: Mmwyl1_2699
Name: xdhA
Funciton: Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A (1.17.1.4)
Locus tag: Mmwyl1_2698
Name: xdhB
Funciton: Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4)
Locus tag: Mmwyl1_2697
Name: xdhC
Funciton: XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase)
xdhA-xdhB-xdhC -83 5 ATTTGTACGATTGGTCAGGT Mmwyl1_2699
Oceanobacter sp. RED65
Position: -230
Score: 5.42876
Sequence: AACTGACCATATGGACAGAA
Position: -125
Score: 5.70112
Sequence: AGCTGACTAATTGGTCAGAT
Locus tag: RED65_04290
Name: xdhA
Funciton: Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A (1.17.1.4)
Locus tag: RED65_04295
Name: xdhB
Funciton: Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4)
Locus tag: RED65_04300
Name: xdhC
Funciton: XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase)
Locus tag: RED65_04305
Name: allC
Funciton: Allantoicase (EC 3.5.3.4)
Locus tag: RED65_04310
Name: pucL
Funciton: Uricase (EC 1.7.3.3)
Locus tag: RED65_04315
Name: pucM
Funciton: Hydroxyisourate hydrolase (EC 3.5.2.17)
Locus tag: RED65_04320
Name: allA
Funciton: Ureidoglycolate hydrolase (EC 3.5.3.19)
Locus tag: RED65_04325
Name: guaD
Funciton: Guanine deaminase (EC 3.5.4.3)
Locus tag: RED65_04330
Name: COG3748
Funciton: Predicted inner membrane protein
xdhA-xdhB-xdhC-allC-pucL-pucM-allA-guaD-COG3748 -230 5.4 AACTGACCATATGGACAGAA RED65_04290
-125 5.7 AGCTGACTAATTGGTCAGAT
Reinekea sp. MED297
Position: -147
Score: 5.86323
Sequence: ACCTGACCGCATGGTCAGCT
Locus tag: MED297_08316
Name: xdhA
Funciton: Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A (1.17.1.4)
Locus tag: MED297_08321
Name: xdhB
Funciton: Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4)
Locus tag: MED297_08326
Name: xdhC
Funciton: XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase)
Locus tag: MED297_08331
Name: allB
Funciton: Allantoinase (EC 3.5.2.5)
Locus tag: MED297_08336
Name: pucL
Funciton: Uricase (EC 1.7.3.3)
Locus tag: MED297_08341
Name: pucM
Funciton: Hydroxyisourate hydrolase (EC 3.5.2.17)
Locus tag: MED297_08346
Name: COG3748
Funciton: Predicted inner membrane protein
xdhA-xdhB-xdhC-allB-pucL-pucM-COG3748 -147 5.9 ACCTGACCGCATGGTCAGCT MED297_08316
Teredinibacter turnerae T7901
Position: -252
Score: 4.66985
Sequence: ATTTGACCACTAGGACAAAT
Position: -89
Score: 5.64764
Sequence: ACCTGACCGAATGGCCAGCT
Locus tag: TERTU_2067
Name: xdhA
Funciton: Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A (1.17.1.4)
Locus tag: TERTU_2066
Name: xdhB
Funciton: Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4)
Locus tag: TERTU_2065
Name: xdhC
Funciton: XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase)
Locus tag: TERTU_2064
Name: pucL
Funciton: Uricase (EC 1.7.3.3)
Locus tag: TERTU_2063
Name: pucM
Funciton: Hydroxyisourate hydrolase (EC 3.5.2.17)
Locus tag: TERTU_2062
Name: guaD
Funciton: Guanine deaminase (EC 3.5.4.3)
Locus tag: TERTU_2061
Name: COG3748
Funciton: Predicted inner membrane protein
xdhA-xdhB-xdhC-pucL-pucM-guaD-COG3748 -252 4.7 ATTTGACCACTAGGACAAAT TERTU_2067
-89 5.6 ACCTGACCGAATGGCCAGCT
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