Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ppuA gene

Properties
Regulog: RutR - Oceanospirillales/Alteromonadales
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Pyrimidine utilization
Effector: Uracil
Phylum: Proteobacteria/gamma
Built upon 32 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Cellvibrio japonicus Ueda107
Position: -165
Score: 4.51594
Sequence: GACTGGCCAAATAGACAATT
Position: -41
Score: 4.42269
Sequence: TTTTGTCCGTGCAGTCAGGT
Locus tag: CJA_0545
Name: ppuA
Funciton: Predicted ABC transporter, ATP-binding protein
Locus tag: CJA_0544
Name: ppuC
Funciton: Predicted ABC transporter, permease protein
Locus tag: CJA_0543
Name: ppuD
Funciton: Predicted ABC transporter, inner membrane protein precursor
Locus tag: CJA_0542
Name: ppuB
Funciton: Predicted ABC transporter, substrate-binding protein precursor
Locus tag: CJA_0541
Name: rutR
Funciton: Transcriptional regulator RutR of pyrimidine catabolism, TetR family
Locus tag: CJA_0540
Name: ssnA
Funciton: Predicted chlorohydrolase/aminohydrolase
ppuA-ppuC-ppuD-ppuB-rutR-ssnA -165 4.5 GACTGGCCAAATAGACAATT CJA_0545
-41 4.4 TTTTGTCCGTGCAGTCAGGT
Hahella chejuensis KCTC 2396
Position: -111
Score: 5.10681
Sequence: TCTTGACTACTTGGTCAGAA
Locus tag: HCH_02310
Name: ppuA
Funciton: Predicted ABC transporter, ATP-binding protein
Locus tag: HCH_02311
Name: ppuC
Funciton: Predicted ABC transporter, permease protein
Locus tag: HCH_02312
Name: ppuD
Funciton: Predicted ABC transporter, inner membrane protein precursor
ppuA-ppuC-ppuD -111 5.1 TCTTGACTACTTGGTCAGAA HCH_02310
Marinomonas sp. MWYL1
Position: -185
Score: 4.46966
Sequence: TATTAACTAGTCGGTCAGAT
Locus tag: Mmwyl1_1926
Name: ppuA
Funciton: Predicted ABC transporter, ATP-binding protein
Locus tag: Mmwyl1_1925
Name: ppuC
Funciton: Predicted ABC transporter, permease protein
Locus tag: Mmwyl1_1924
Name: ppuD
Funciton: Predicted ABC transporter, inner membrane protein precursor
Locus tag: Mmwyl1_1923
Name: ppuB
Funciton: Predicted ABC transporter, substrate-binding protein precursor
Locus tag: Mmwyl1_1922
Name: add
Funciton: Adenosine deaminase (EC 3.5.4.4)
ppuA-ppuC-ppuD-ppuB-add -185 4.5 TATTAACTAGTCGGTCAGAT Mmwyl1_1926
Reinekea sp. MED297
Position: -2
Score: 4.30815
Sequence: TCATGACTGCTCAGACAGAT
Locus tag: MED297_21307
Name: ppuA
Funciton: Predicted ABC transporter, ATP-binding protein
Locus tag: MED297_21302
Name: ppuC
Funciton: Predicted ABC transporter, permease protein
Locus tag: MED297_21297
Name: ppuD
Funciton: Predicted ABC transporter, inner membrane protein precursor
ppuA-ppuC-ppuD -2 4.3 TCATGACTGCTCAGACAGAT MED297_21307