Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing acdH3 gene

Properties
Regulog: LiuR - Sphingomonadales
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: repressor
Biological process: Branched-chain amino acid degradation
Effector:
Phylum: Proteobacteria/alpha
Built upon 65 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Erythrobacter litoralis HTCC2594
Position: -73
Score: 5.7313
Sequence: GTTGACGTTTTCGTAAAG
Locus tag: ELI_00050
Name: acdA
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: ELI_00055
Name: null
Funciton: Alpha-methylacyl-CoA racemase (EC 5.1.99.4)
Locus tag: ELI_00060
Name: acdH3
Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
acdA-ELI_00055-acdH3 -73 5.7 GTTGACGTTTTCGTAAAG ELI_00050
Erythrobacter sp. NAP1
Position: -60
Score: 4.93303
Sequence: GTTGACGGACACGTCACC
Locus tag: NAP1_09247
Name: fpr
Funciton: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
Locus tag: NAP1_09242
Name: null
Funciton: hypothetical protein
Locus tag: NAP1_09237
Name: acdH3
Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
fpr-NAP1_09242-acdH3 -60 4.9 GTTGACGGACACGTCACC NAP1_09247
Sphingopyxis alaskensis RB2256
Position: -93
Score: 5.44474
Sequence: CTTGACGTGGACGTAAAC
Position: -87
Score: 5.45983
Sequence: GTGGACGTAAACGTAAGG
Locus tag: Sala_3159
Name: acdH3
Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Locus tag: Sala_3158
Name: acdA3
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Locus tag: Sala_3157
Name: null
Funciton: 3-hydroxyacyl-CoA dehydrogenase [isoleucine degradation] (EC 1.1.1.35)
Locus tag: Sala_3156
Name: null
Funciton: putative 4-hydroxybenzoyl-CoA thioesterase
acdH3-acdA3-Sala_3157-Sala_3156 -93 5.4 CTTGACGTGGACGTAAAC Sala_3159
-87 5.5 GTGGACGTAAACGTAAGG