Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing bkdB gene

Properties
Regulog: LiuR - Alteromonadales
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: repressor
Biological process: Branched-chain amino acid degradation
Effector:
Phylum: Proteobacteria/gamma
Built upon 65 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Alteromonadales bacterium TW-7
Position: -134
Score: 6.34662
Sequence: CTTTACGTTAACGTAAAG
Locus tag: ATW7_13253
Name: bkdA1
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
Locus tag: ATW7_13248
Name: bkdA2
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
Locus tag: ATW7_13243
Name: bkdB
Funciton: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)
bkdA1-bkdA2-bkdB -134 6.3 CTTTACGTTAACGTAAAG ATW7_13253
Colwellia psychrerythraea 34H
Position: -235
Score: 4.92769
Sequence: GTTAACGTGAAGGTAAAG
Locus tag: CPS_1582
Name: bkdA1
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
Locus tag: CPS_1583
Name: bkdA2
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
Locus tag: CPS_1584
Name: bkdB
Funciton: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)
bkdA1-bkdA2-bkdB -235 4.9 GTTAACGTGAAGGTAAAG CPS_1582
Idiomarina baltica OS145
Position: -61
Score: 5.6634
Sequence: CTTTACGTAAAGGTAAAG
Locus tag: OS145_01872
Name: bkdA1
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
Locus tag: OS145_01867
Name: bkdA2
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
Locus tag: OS145_01862
Name: bkdB
Funciton: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)
bkdA1-bkdA2-bkdB -61 5.7 CTTTACGTAAAGGTAAAG OS145_01872
Idiomarina loihiensis L2TR
Position: -61
Score: 5.6634
Sequence: CTTTACGTAAAGGTAAAG
Locus tag: IL1680
Name: bkdA1
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
Locus tag: IL1679
Name: bkdA2
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
Locus tag: IL1678
Name: bkdB
Funciton: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)
bkdA1-bkdA2-bkdB -61 5.7 CTTTACGTAAAGGTAAAG IL1680
Pseudoalteromonas haloplanktis TAC125
Position: -132
Score: 6.34662
Sequence: CTTTACGTTAACGTAAAG
Locus tag: PSHAa1632
Name: bkdA1
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
Locus tag: PSHAa1631
Name: bkdA2
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
Locus tag: PSHAa1630
Name: bkdB
Funciton: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)
bkdA1-bkdA2-bkdB -132 6.3 CTTTACGTTAACGTAAAG PSHAa1632
Pseudoalteromonas tunicata D2
Position: -224
Score: 6.37434
Sequence: GTTTACGTTAACGTAAAG
Locus tag: PTD2_19360
Name: bkdA1
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
Locus tag: PTD2_19365
Name: bkdA2
Funciton: Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)
Locus tag: PTD2_19370
Name: bkdB
Funciton: Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)
bkdA1-bkdA2-bkdB -224 6.4 GTTTACGTTAACGTAAAG PTD2_19360