Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing topB gene

Properties
Regulog: LexA - Alteromonadales
Regulator type: Transcription factor
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Phylum: Proteobacteria/gamma
Built upon 111 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Alteromonadales bacterium TW-7
Position: -32
Score: 5.94383
Sequence: TACTGTTTATATAACCAGTT
Locus tag: ATW7_10960
Name: topB
Funciton: DNA topoisomerase III (EC 5.99.1.2)
topB -32 5.9 TACTGTTTATATAACCAGTT ATW7_10960
Colwellia psychrerythraea 34H
Position: -71
Score: 5.31261
Sequence: AGCTGTACATAAAACCAGTA
Locus tag: CPS_4792
Name: topB
Funciton: DNA topoisomerase III (EC 5.99.1.2)
topB -71 5.3 AGCTGTACATAAAACCAGTA CPS_4792
Pseudoalteromonas atlantica T6c
Position: -43
Score: 5.36375
Sequence: TACTGTCTTTACATACAGTC
Locus tag: Patl_0776
Name: topB
Funciton: DNA topoisomerase III (EC 5.99.1.2)
topB -43 5.4 TACTGTCTTTACATACAGTC Patl_0776
Pseudoalteromonas haloplanktis TAC125
Position: -94
Score: 4.07626
Sequence: AACTAGAGATATATAAAGTT
Locus tag: PSHAa2356
Name: topB
Funciton: DNA topoisomerase III (EC 5.99.1.2)
topB -94 4.1 AACTAGAGATATATAAAGTT PSHAa2356
Pseudoalteromonas tunicata D2
Position: -33
Score: 5.20643
Sequence: CACTGTTAATCTATACAGTT
Locus tag: PTD2_09304
Name: topB
Funciton: DNA topoisomerase III (EC 5.99.1.2)
topB -33 5.2 CACTGTTAATCTATACAGTT PTD2_09304
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