Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing glnB gene

Properties
Regulog: NtrC - Rhizobiales
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator (repressor)
Biological process: Nitrogen assimilation
Effector: Phosphorylated NtrB, signal histidine kinase
Phylum: Proteobacteria/alpha
Built upon 86 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Agrobacterium tumefaciens str. C58 (Cereon)
Position: -297
Score: 4.11985
Sequence: AGACCAAATAATAGTCA
Position: -278
Score: 4.47473
Sequence: TGCACAAAATATAAACA
Locus tag: Atu1769
Name: glnB
Funciton: Nitrogen regulatory protein P-II
Locus tag: Atu1770
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
glnB-glnA -297 4.1 AGACCAAATAATAGTCA Atu1769
-278 4.5 TGCACAAAATATAAACA
Azorhizobium caulinodans ORS 571
Position: -134
Score: 4.40436
Sequence: CGCATACTATTTAGGCA
Locus tag: AZC_1602
Name: glnB
Funciton: Nitrogen regulatory protein P-II
Locus tag: AZC_1601
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
glnB-glnA -134 4.4 CGCATACTATTTAGGCA AZC_1602
Bradyrhizobium japonicum USDA 110
Position: -290
Score: 3.63492
Sequence: TGCCTATTTCGTAGTCT
Locus tag: blr4948
Name: glnB
Funciton: Nitrogen regulatory protein P-II
Locus tag: blr4949
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
glnB-glnA -290 3.6 TGCCTATTTCGTAGTCT blr4948
Bradyrhizobium sp. BTAi1
Position: -300
Score: 3.75361
Sequence: TGCACAACGTTTGATCT
Locus tag: BBta_4580
Name: glnB
Funciton: Nitrogen regulatory protein P-II
Locus tag: BBta_4581
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
glnB-glnA -300 3.8 TGCACAACGTTTGATCT BBta_4580
Brucella melitensis 16M
Position: -220
Score: 5.20311
Sequence: TGCATAATTTTTAAGCA
Locus tag: BMEI0978
Name: glnB
Funciton: Nitrogen regulatory protein P-II
Locus tag: BMEI0979
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
glnB-glnA -220 5.2 TGCATAATTTTTAAGCA BMEI0978
Mesorhizobium loti MAFF303099
Position: -222
Score: 4.52948
Sequence: TGCCTAATTCTTATGCG
Locus tag: mll0345
Name: glnB
Funciton: Nitrogen regulatory protein P-II
Locus tag: mll0343
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
glnB-glnA -222 4.5 TGCCTAATTCTTATGCG mll0345
Nitrobacter winogradskyi Nb-255
Position: -298
Score: 4.47034
Sequence: CGCACAAAAATTGAACA
Locus tag: Nwi_1903
Name: glnB
Funciton: Nitrogen regulatory protein P-II
Locus tag: Nwi_1904
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
glnB-glnA -298 4.5 CGCACAAAAATTGAACA Nwi_1903
Rhizobium etli CFN 42
Position: -287
Score: 3.84751
Sequence: AGACCCAAATTTGTGCA
Position: -268
Score: 4.40488
Sequence: TGCTTATCTTTTAATCA
Locus tag: RHE_CH02103
Name: glnB
Funciton: Nitrogen regulatory protein P-II
Locus tag: RHE_CH02102
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
glnB-glnA -287 3.8 AGACCCAAATTTGTGCA RHE_CH02103
-268 4.4 TGCTTATCTTTTAATCA
Rhizobium leguminosarum bv. viciae 3841
Position: -269
Score: 4.15204
Sequence: TGCCTATATTTTCATCT
Locus tag: RL2393
Name: glnB
Funciton: Nitrogen regulatory protein P-II
Locus tag: RL2392
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
glnB-glnA -269 4.2 TGCCTATATTTTCATCT RL2393
Rhizobium sp. NGR234
Position: -287
Score: 4.31792
Sequence: TGATGACTTATTATGCA
Position: -255
Score: 4.07414
Sequence: TGCTCAAATAACAGGCT
Locus tag: NGR_c14750
Name: glnB
Funciton: Nitrogen regulatory protein P-II
Locus tag: NGR_c14740
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
glnB-glnA -287 4.3 TGATGACTTATTATGCA NGR_c14750
-255 4.1 TGCTCAAATAACAGGCT
Rhodopseudomonas palustris CGA009
Position: -320
Score: 4.84201
Sequence: TGCTGAATAATTGATCA
Locus tag: RPA2966
Name: glnB
Funciton: Nitrogen regulatory protein P-II
Locus tag: RPA2967
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
glnB-glnA -320 4.8 TGCTGAATAATTGATCA RPA2966
Sinorhizobium meliloti 1021
Position: -286
Score: 4.35868
Sequence: TGACTAAGAAATGTGCA
Position: -254
Score: 4.10616
Sequence: TGCTCAAATAACATGCT
Locus tag: SMc00947
Name: glnB
Funciton: Nitrogen regulatory protein P-II
Locus tag: SMc00948
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
glnB-glnA -286 4.4 TGACTAAGAAATGTGCA SMc00947
-254 4.1 TGCTCAAATAACATGCT
Xanthobacter autotrophicus Py2
Position: -138
Score: 4.18316
Sequence: AGCCTATTTCATGAGCA
Locus tag: Xaut_3586
Name: glnB
Funciton: Nitrogen regulatory protein P-II
Locus tag: Xaut_3585
Name: glnA
Funciton: Glutamine synthetase type I (EC 6.3.1.2)
glnB-glnA -138 4.2 AGCCTATTTCATGAGCA Xaut_3586
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