Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing nasD gene

Properties
Regulog: NtrC - Comamonadaceae
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator (repressor)
Biological process: Nitrogen assimilation
Effector: Phosphorylated NtrB, signal histidine kinase
Phylum: Proteobacteria/beta
Built upon 52 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Acidovorax avenae subsp. citrulli AAC00-1
Position: -331
Score: 4.39075
Sequence: TGCACCGAAGCGGTTCA
Locus tag: Aave_2107
Name: nasD
Funciton: Nitrite reductase, large subunit (EC 1.7.1.4)
Locus tag: Aave_2106
Name: nasE
Funciton: Nitrite reductase, small subunit (EC 1.7.1.4)
nasD-nasE -331 4.4 TGCACCGAAGCGGTTCA Aave_2107
Acidovorax sp. JS42
Position: -328
Score: 4.46735
Sequence: TGCACCACGGCGGTGCG
Locus tag: Ajs_2839
Name: nasD
Funciton: Nitrite reductase, large subunit (EC 1.7.1.4)
Locus tag: Ajs_2840
Name: nasE
Funciton: Nitrite reductase, small subunit (EC 1.7.1.4)
nasD-nasE -328 4.5 TGCACCACGGCGGTGCG Ajs_2839
Comamonas testosteroni KF-1
Position: -219
Score: 4.75442
Sequence: TGCACAAAAGCAGTGCA
Locus tag: CtesDRAFT_4526
Name: nasD
Funciton: Nitrite reductase, large subunit (EC 1.7.1.4)
Locus tag: CtesDRAFT_4594
Name: nasE
Funciton: Nitrite reductase, small subunit (EC 1.7.1.4)
Locus tag: CtesDRAFT_4527
Name: nasA
Funciton: Assimilatory nitrate reductase, large subunit (EC:1.7.99.4)
Locus tag: CtesDRAFT_4528
Name: cysG
Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
nasD-nasE-nasA-cysG -219 4.8 TGCACAAAAGCAGTGCA CtesDRAFT_4526
Delftia acidovorans SPH-1
Position: -252
Score: 4.61777
Sequence: CGCACCGCTTTGATGCA
Locus tag: Daci_2371
Name: nasD
Funciton: Nitrite reductase, large subunit (EC 1.7.1.4)
Locus tag: Daci_2370
Name: nasA
Funciton: Assimilatory nitrate reductase, large subunit (EC:1.7.99.4)
Locus tag: Daci_2369
Name: ybiB
Funciton: Conserved hypothetical protein
Locus tag: Daci_2368
Name: cysG
Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
nasD-nasA-ybiB-cysG -252 4.6 CGCACCGCTTTGATGCA Daci_2371
Rhodoferax ferrireducens DSM 15236
Position: -315
Score: 5.06905
Sequence: TGCACAAAACTGGTGCC
Locus tag: Rfer_2554
Name: nrtA
Funciton: Nitrate ABC transporter, substrate-binding component
Locus tag: Rfer_2555
Name: nrtB
Funciton: Nitrate ABC transporter, permease component
Locus tag: Rfer_2556
Name: nrtC
Funciton: Nitrate ABC transporter, ATP-binding component
Locus tag: Rfer_2557
Name: nasD
Funciton: Nitrite reductase, large subunit (EC 1.7.1.4)
Locus tag: Rfer_2558
Name: nasE
Funciton: Nitrite reductase, small subunit (EC 1.7.1.4)
nrtA-nrtB-nrtC-nasD-nasE -315 5.1 TGCACAAAACTGGTGCC Rfer_2554
Variovorax paradoxus S110
Position: -189
Score: 4.55706
Sequence: AGCACTGTTTTGGTGAG
Locus tag: Vapar_2849
Name: nasD
Funciton: Nitrite reductase, large subunit (EC 1.7.1.4)
Locus tag: Vapar_2848
Name: nasE
Funciton: Nitrite reductase, small subunit (EC 1.7.1.4)
Locus tag: Vapar_2847
Name: cysG
Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
nasD-nasE-cysG -189 4.6 AGCACTGTTTTGGTGAG Vapar_2849