Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing nrtB gene

Properties
Regulog: NtrC - Comamonadaceae
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator (repressor)
Biological process: Nitrogen assimilation
Effector: Phosphorylated NtrB, signal histidine kinase
Phylum: Proteobacteria/beta
Built upon 52 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Acidovorax avenae subsp. citrulli AAC00-1
Position: -282
Score: 4.83733
Sequence: CGCACGAAGAGGGTGCA
Locus tag: Aave_2147
Name: nrtA
Funciton: Nitrate ABC transporter, substrate-binding component
Locus tag: Aave_2146
Name: nrtB
Funciton: Nitrate ABC transporter, permease component
Locus tag: Aave_2145
Name: nrtC
Funciton: Nitrate ABC transporter, ATP-binding component
nrtA-nrtB-nrtC -282 4.8 CGCACGAAGAGGGTGCA Aave_2147
Acidovorax sp. JS42
Position: -314
Score: 5.03033
Sequence: TGCACAAATGCGGTGCA
Locus tag: Ajs_2831
Name: nrtA
Funciton: Nitrate ABC transporter, substrate-binding component
Locus tag: Ajs_2832
Name: nrtB
Funciton: Nitrate ABC transporter, permease component
Locus tag: Ajs_2833
Name: nrtC
Funciton: Nitrate ABC transporter, ATP-binding component
nrtA-nrtB-nrtC -314 5 TGCACAAATGCGGTGCA Ajs_2831
Comamonas testosteroni KF-1
Position: -232
Score: 4.53147
Sequence: TGCACCAAATATGGGCC
Locus tag: CtesDRAFT_4523
Name: nrtA
Funciton: Nitrate ABC transporter, substrate-binding component
Locus tag: CtesDRAFT_4524
Name: nrtB
Funciton: Nitrate ABC transporter, permease component
Locus tag: CtesDRAFT_4525
Name: nrtC
Funciton: Nitrate ABC transporter, ATP-binding component
nrtA-nrtB-nrtC -232 4.5 TGCACCAAATATGGGCC CtesDRAFT_4523
Delftia acidovorans SPH-1
Position: -277
Score: 4.86857
Sequence: AGCACCGACTTGGTGCC
Locus tag: Daci_2377
Name: nrtA
Funciton: Nitrate ABC transporter, substrate-binding component
Locus tag: Daci_2376
Name: nrtB
Funciton: Nitrate ABC transporter, permease component
Locus tag: Daci_2375
Name: nrtC
Funciton: Nitrate ABC transporter, ATP-binding component
nrtA-nrtB-nrtC -277 4.9 AGCACCGACTTGGTGCC Daci_2377
Leptothrix cholodnii SP-6
Position: -300
Score: 4.35164
Sequence: TGCACGCCCATGGTGCG
Locus tag: Lcho_3843
Name: nrtA
Funciton: Nitrate ABC transporter, substrate-binding component
Locus tag: Lcho_3842
Name: nrtB
Funciton: Nitrate ABC transporter, permease component
Locus tag: Lcho_3841
Name: nrtC
Funciton: Nitrate ABC transporter, ATP-binding component
nrtA-nrtB-nrtC -300 4.4 TGCACGCCCATGGTGCG Lcho_3843
Polaromonas naphthalenivorans CJ2
Position: -334
Score: 4.74124
Sequence: GGCGCCGAAATGGTGCA
Locus tag: Pnap_1414
Name: nrtA
Funciton: Nitrate ABC transporter, substrate-binding component
Locus tag: Pnap_1413
Name: nrtB
Funciton: Nitrate ABC transporter, permease component
Locus tag: Pnap_1412
Name: nrtC
Funciton: Nitrate ABC transporter, ATP-binding component
Locus tag: Pnap_1411
Name: narK
Funciton: Nitrate/nitrite antiporter
nrtA-nrtB-nrtC-narK -334 4.7 GGCGCCGAAATGGTGCA Pnap_1414
Rhodoferax ferrireducens DSM 15236
Position: -315
Score: 5.06905
Sequence: TGCACAAAACTGGTGCC
Locus tag: Rfer_2554
Name: nrtA
Funciton: Nitrate ABC transporter, substrate-binding component
Locus tag: Rfer_2555
Name: nrtB
Funciton: Nitrate ABC transporter, permease component
Locus tag: Rfer_2556
Name: nrtC
Funciton: Nitrate ABC transporter, ATP-binding component
Locus tag: Rfer_2557
Name: nasD
Funciton: Nitrite reductase, large subunit (EC 1.7.1.4)
Locus tag: Rfer_2558
Name: nasE
Funciton: Nitrite reductase, small subunit (EC 1.7.1.4)
nrtA-nrtB-nrtC-nasD-nasE -315 5.1 TGCACAAAACTGGTGCC Rfer_2554
Variovorax paradoxus S110
Position: -313
Score: 4.26536
Sequence: CGCACAACAAGCGTGCA
Locus tag: Vapar_3522
Name: nrtA
Funciton: Nitrate ABC transporter, substrate-binding component
Locus tag: Vapar_3523
Name: nrtB
Funciton: Nitrate ABC transporter, permease component
Locus tag: Vapar_3524
Name: nrtC
Funciton: Nitrate ABC transporter, ATP-binding component
nrtA-nrtB-nrtC -313 4.3 CGCACAACAAGCGTGCA Vapar_3522