Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing bioD gene

Properties
Regulog: BirA - Pseudomonadaceae
Regulator type: Transcription factor
Regulator family: BirA
Regulation mode: repressor
Biological process: Biotin biosynthesis
Effector: Biotin
Phylum: Proteobacteria/Gamma
Built upon 15 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Pseudomonas aeruginosa PAO1
Position: -129
Score: 7.4675
Sequence: ATGTAGTCC-(14)-GGTTGACAG
Locus tag: PA0500
Name: bioB
Funciton: Biotin synthase (EC 2.8.1.6)
Locus tag: PA0501
Name: bioF
Funciton: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)
Locus tag: PA0502
Name: bioH
Funciton: hypothetical protein
Locus tag: PA0503
Name: bioC
Funciton: Biotin synthesis protein bioC
Locus tag: PA0504
Name: bioD
Funciton: Dethiobiotin synthetase (EC 6.3.3.3)
bioB-bioF-bioH-bioC-bioD -129 7.5 ATGTAGTCC-(14)-GGTTGACAG PA0500
Pseudomonas entomophila L48
Position: -127
Score: 8.10836
Sequence: TTGTAAGCC-(15)-GGTTGACAG
Locus tag: PSEEN5121
Name: bioB
Funciton: Biotin synthase (EC 2.8.1.6)
Locus tag: PSEEN5120
Name: bioF
Funciton: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)
Locus tag: PSEEN5119
Name: bioH
Funciton: hypothetical protein
Locus tag: PSEEN5118
Name: bioC
Funciton: Biotin synthesis protein bioC
Locus tag: PSEEN5117
Name: bioD
Funciton: Dethiobiotin synthetase (EC 6.3.3.3)
bioB-bioF-bioH-bioC-bioD -127 8.1 TTGTAAGCC-(15)-GGTTGACAG PSEEN5121
Pseudomonas fluorescens Pf-5
Position: -128
Score: 8.81229
Sequence: ATGTAAACC-(15)-GGTTGACAG
Locus tag: PFL_5693
Name: bioB
Funciton: Biotin synthase (EC 2.8.1.6)
Locus tag: PFL_5692
Name: bioF
Funciton: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)
Locus tag: PFL_5691
Name: bioH
Funciton: hypothetical protein
Locus tag: PFL_5690
Name: bioC
Funciton: Biotin synthesis protein bioC
Locus tag: PFL_5689
Name: bioD
Funciton: Dethiobiotin synthetase (EC 6.3.3.3)
bioB-bioF-bioH-bioC-bioD -128 8.8 ATGTAAACC-(15)-GGTTGACAG PFL_5693
Pseudomonas putida KT2440
Position: -127
Score: 8.5622
Sequence: TTGTAAACC-(15)-AGTTGACAG
Locus tag: PP0362
Name: bioB
Funciton: Biotin synthase (EC 2.8.1.6)
Locus tag: PP0363
Name: bioF
Funciton: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)
Locus tag: PP0364
Name: bioH
Funciton: hypothetical protein
Locus tag: PP0365
Name: bioC
Funciton: Biotin synthesis protein bioC
Locus tag: PP0366
Name: bioD
Funciton: Dethiobiotin synthetase (EC 6.3.3.3)
bioB-bioF-bioH-bioC-bioD -127 8.6 TTGTAAACC-(15)-AGTTGACAG PP0362
Pseudomonas stutzeri A1501
Position: -104
Score: 8.99046
Sequence: TTGTAAACC-(14)-GGTTGACAG
Locus tag: PST_3866
Name: bioB
Funciton: Biotin synthase (EC 2.8.1.6)
Locus tag: PST_3865
Name: bioF
Funciton: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)
Locus tag: PST_3864
Name: bioH
Funciton: hypothetical protein
Locus tag: PST_3863
Name: bioC
Funciton: Biotin synthesis protein bioC
Locus tag: PST_3862
Name: bioD
Funciton: Dethiobiotin synthetase (EC 6.3.3.3)
bioB-bioF-bioH-bioC-bioD -104 9 TTGTAAACC-(14)-GGTTGACAG PST_3866
Pseudomonas syringae pv. tomato str. DC3000
Position: -128
Score: 8.81229
Sequence: ATGTAAACC-(15)-GGTTGACAG
Locus tag: PSPTO0494
Name: bioB
Funciton: Biotin synthase (EC 2.8.1.6)
Locus tag: PSPTO0495
Name: bioF
Funciton: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)
Locus tag: PSPTO0496
Name: bioH
Funciton: hypothetical protein
Locus tag: PSPTO0497
Name: bioC
Funciton: Biotin synthesis protein bioC
Locus tag: PSPTO0498
Name: bioD
Funciton: Dethiobiotin synthetase (EC 6.3.3.3)
bioB-bioF-bioH-bioC-bioD -128 8.8 ATGTAAACC-(15)-GGTTGACAG PSPTO0494