Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing yghZ gene

Properties
Regulog: RhgR - Bacillales
Regulator type: Transcription factor
Regulator family: AraC
Regulation mode: activator
Biological process: Rhamnogalacturonides utilization
Effector:
Phylum: Firmicutes
Built upon 4 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Bacillus licheniformis DSM 13
Position: -97
Score: 10.7611
Sequence: CTCTGTTTTTT-(10)-CTCTGTTTTTT
Locus tag: BLi01368
Name: rhiL
Funciton: Putatuve rhamnogalacturonides ABC transporter, substrate-binding protein
Locus tag: BLi01369
Name: rhiF
Funciton: Putatuve rhamnogalacturonides ABC transporter, permease component 1
Locus tag: BLi01370
Name: rhiG
Funciton: Putatuve rhamnogalacturonides ABC transporter, permease component 2
Locus tag: BLi01371
Name: rhiN1
Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
Locus tag: BLi01372
Name: rhgR
Funciton: Transcriptional regulator of rhamnogalacturonan utilization, AraC family
Locus tag: BLi01373
Name: yesT
Funciton: Rhamnogalacturonan acetylesterase
Locus tag: BLi01374
Name: yesU
Funciton: Hypothetical protein
Locus tag: BLi01375
Name: yesV
Funciton: Putative integral inner membrane component
Locus tag: BLi01376
Name: yesW
Funciton: Predicted rhamnogalacturonan lyase in rhamnose utilization cluster
Locus tag: BLi01377
Name: null
Funciton: Hypothetical protein
Locus tag: BLi01378
Name: yesT
Funciton: Rhamnogalacturonan acetylesterase
Locus tag: BLi01379
Name: yesX
Funciton: Predicted rhamnogalacturonan lyase in rhamnose utilization cluster
Locus tag: BLi01380
Name: yghZ
Funciton: Putative ion-channel protein
Locus tag: BLi01381
Name: yesY
Funciton: Possible rhamnogalacturan acetylesterase
Locus tag: BLi01382
Name: yesZ
Funciton: Beta-galactosidase (EC 3.2.1.23)
rhiL-rhiF-rhiG-rhiN1-rhgR-yesT-yesU-yesV-yesW-BLi01377-yesT-yesX-yghZ-yesY-yesZ -97 10.8 CTCTGTTTTTT-(10)-CTCTGTTTTTT BLi01368