Orthologous regulated operons containing rhiL gene

Properties
Regulog:	RhgR - Bacillales
Regulator type:	Transcription factor
Regulator family:	AraC
Regulation mode:	activator
Biological process:	Rhamnogalacturonides utilization
Effector:
Phylum:	Firmicutes

Built upon 4 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Bacillus licheniformis DSM 13
Position: -97 Score: 10.7611 Sequence: CTCTGTTTTTT-(10)-CTCTGTTTTTT Locus tag: BLi01368 Name: rhiL Funciton: Putatuve rhamnogalacturonides ABC transporter, substrate-binding protein Locus tag: BLi01369 Name: rhiF Funciton: Putatuve rhamnogalacturonides ABC transporter, permease component 1 Locus tag: BLi01370 Name: rhiG Funciton: Putatuve rhamnogalacturonides ABC transporter, permease component 2 Locus tag: BLi01371 Name: rhiN1 Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172) Locus tag: BLi01372 Name: rhgR Funciton: Transcriptional regulator of rhamnogalacturonan utilization, AraC family Locus tag: BLi01373 Name: yesT Funciton: Rhamnogalacturonan acetylesterase Locus tag: BLi01374 Name: yesU Funciton: Hypothetical protein Locus tag: BLi01375 Name: yesV Funciton: Putative integral inner membrane component Locus tag: BLi01376 Name: yesW Funciton: Predicted rhamnogalacturonan lyase in rhamnose utilization cluster Locus tag: BLi01377 Name: null Funciton: Hypothetical protein Locus tag: BLi01378 Name: yesT Funciton: Rhamnogalacturonan acetylesterase Locus tag: BLi01379 Name: yesX Funciton: Predicted rhamnogalacturonan lyase in rhamnose utilization cluster Locus tag: BLi01380 Name: yghZ Funciton: Putative ion-channel protein Locus tag: BLi01381 Name: yesY Funciton: Possible rhamnogalacturan acetylesterase Locus tag: BLi01382 Name: yesZ Funciton: Beta-galactosidase (EC 3.2.1.23)
rhiL-rhiF-rhiG-rhiN1-rhgR-yesT-yesU-yesV-yesW-BLi01377-yesT-yesX-yghZ-yesY-yesZ	-97	10.8	CTCTGTTTTTT-(10)-CTCTGTTTTTT	BLi01368
Bacillus subtilis subsp. subtilis str. 168
Position: -99 Score: 10.6037 Sequence: CTCTGTTTTTT-(10)-CACTGTTTTTT Locus tag: BSU06970 Name: rhiL Funciton: Putatuve rhamnogalacturonides ABC transporter, substrate-binding protein Locus tag: BSU06980 Name: rhiF Funciton: Putatuve rhamnogalacturonides ABC transporter, permease component 1 Locus tag: BSU06990 Name: rhiG Funciton: Putatuve rhamnogalacturonides ABC transporter, permease component 2 Locus tag: BSU07000 Name: rhiN1 Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172) Locus tag: BSU07010 Name: rhgR Funciton: Transcriptional regulator of rhamnogalacturonan utilization, AraC family Locus tag: BSU07020 Name: yesT Funciton: Rhamnogalacturonan acetylesterase Locus tag: BSU07030 Name: yesU Funciton: Hypothetical protein Locus tag: BSU07040 Name: yesV Funciton: Putative integral inner membrane component Locus tag: BSU07050 Name: yesW Funciton: Predicted rhamnogalacturonan lyase in rhamnose utilization cluster Locus tag: BSU07060 Name: yesX Funciton: Predicted rhamnogalacturonan lyase in rhamnose utilization cluster Locus tag: BSU07070 Name: yesY Funciton: Possible rhamnogalacturan acetylesterase Locus tag: BSU07080 Name: yesZ Funciton: Beta-galactosidase (EC 3.2.1.23)
rhiL-rhiF-rhiG-rhiN1-rhgR-yesT-yesU-yesV-yesW-yesX-yesY-yesZ	-99	10.6	CTCTGTTTTTT-(10)-CACTGTTTTTT	BSU06970
Paenibacillus sp. JDR-2
Position: -110 Score: 9.22038 Sequence: GTCTGTTTTTT-(10)-CACTGGTTATT Position: -89 Score: 9.30361 Sequence: CACTGGTTATT-(10)-CTCTCCTTTTT Locus tag: Pjdr2_3535 Name: rhiL Funciton: Putatuve rhamnogalacturonides ABC transporter, substrate-binding protein Locus tag: Pjdr2_3534 Name: rhiF Funciton: Putatuve rhamnogalacturonides ABC transporter, permease component 1 Locus tag: Pjdr2_3533 Name: rhiG Funciton: Putatuve rhamnogalacturonides ABC transporter, permease component 2
rhiL-rhiF-rhiG	-110	9.2	GTCTGTTTTTT-(10)-CACTGGTTATT	Pjdr2_3535
	-89	9.3	CACTGGTTATT-(10)-CTCTCCTTTTT