Orthologous regulated operons containing ybbF gene

Properties
Regulog:	CodY - Bacillales
Regulator type:	Transcription factor
Regulator family:	CodY
Regulation mode:
Biological process:	Amino acid metabolism
Effector:	Guanosine triphosphate; Branched-chain amino acids
Phylum:	Firmicutes

Built upon 445 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Bacillus licheniformis DSM 13
Position: -53 Score: 4.84058 Sequence: AATATACTGAAAATT Locus tag: BLi00191 Name: murQ Funciton: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-) Locus tag: BLi00190 Name: murR Funciton: Transcriptional regulator of muropeptide rescue pathway operon, RpiR family Locus tag: BLi00189 Name: ybbF Funciton: PTS system, IIB component (EC 2.7.1.69) / PTS system, IIC component (EC 2.7.1.69) Locus tag: BLi00188 Name: amiE Funciton: Amidase of hydrolyzes the N-acetylmuramyl- L-Ala bond of MurNAc peptides Locus tag: BLi00187 Name: nagZ Funciton: Beta--N-acetylglucosaminidase Locus tag: BLi00186 Name: ybbC Funciton: Hypothetical protein
murQ-murR-ybbF-amiE-nagZ-ybbC	-53	4.8	AATATACTGAAAATT	BLi00191
Bacillus pumilus SAFR-032
Position: -131 Score: 4.53832 Sequence: TATTTTCTAACTATT Locus tag: BPUM_0158 Name: murQ Funciton: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-) Locus tag: BPUM_0157 Name: murR Funciton: Transcriptional regulator of muropeptide rescue pathway operon, RpiR family Locus tag: BPUM_0156 Name: ybbF Funciton: PTS system, IIB component (EC 2.7.1.69) / PTS system, IIC component (EC 2.7.1.69) Locus tag: BPUM_0155 Name: amiE Funciton: Amidase of hydrolyzes the N-acetylmuramyl- L-Ala bond of MurNAc peptides Locus tag: BPUM_0154 Name: nagZ Funciton: Beta--N-acetylglucosaminidase Locus tag: BPUM_0153 Name: ybbC Funciton: Hypothetical protein
murQ-murR-ybbF-amiE-nagZ-ybbC	-131	4.5	TATTTTCTAACTATT	BPUM_0158
Bacillus subtilis subsp. subtilis str. 168
Position: -95 Score: 4.41137 Sequence: AAATTTCAAAAATTT Position: -48 Score: 4.63545 Sequence: AATATACTGAATATT Locus tag: BSU01700 Name: murQ Funciton: N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-) Locus tag: BSU01690 Name: murR Funciton: Transcriptional regulator of muropeptide rescue pathway operon, RpiR family Locus tag: BSU01680 Name: ybbF Funciton: PTS system, IIB component (EC 2.7.1.69) / PTS system, IIC component (EC 2.7.1.69) Locus tag: BSU01670 Name: amiE Funciton: Amidase of hydrolyzes the N-acetylmuramyl- L-Ala bond of MurNAc peptides Locus tag: BSU01660 Name: nagZ Funciton: Beta--N-acetylglucosaminidase Locus tag: BSU01650 Name: ybbC Funciton: Hypothetical protein
murQ-murR-ybbF-amiE-nagZ-ybbC	-95	4.4	AAATTTCAAAAATTT	BSU01700
	-48	4.6	AATATACTGAATATT