Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing xdhB gene

Properties
Regulog: RutR3 - Pseudomonadaceae
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Pyrimidine utilization
Effector: Uracil
Phylum: Proteobacteria/gamma
Built upon 23 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Pseudomonas aeruginosa PAO1
Position: -163
Score: 4.14616
Sequence: GACTGACCTACAGGTCAAAA
Position: -139
Score: 5.35349
Sequence: ATTTGACTCAAAAGTCAGTT
Locus tag: PA1524
Name: xdhA
Funciton: Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A (1.17.1.4)
Locus tag: PA1523
Name: xdhB
Funciton: Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4)
Locus tag: PA1522
Name: xdhC
Funciton: XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase)
Locus tag: PA1521
Name: guaD
Funciton: Guanine deaminase (EC 3.5.4.3)
xdhA-xdhB-xdhC-guaD -163 4.1 GACTGACCTACAGGTCAAAA PA1524
-139 5.4 ATTTGACTCAAAAGTCAGTT
Pseudomonas entomophila L48
Position: -95
Score: 5.941
Sequence: TCTTGACCCAAAGGTCAGAA
Position: -72
Score: 5.28235
Sequence: TATTGACCACAAGGTCAGGC
Locus tag: PSEEN1765
Name: xdhA
Funciton: Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A (1.17.1.4)
Locus tag: PSEEN1764
Name: xdhB
Funciton: Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4)
Locus tag: PSEEN1763
Name: xdhC
Funciton: XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase)
Locus tag: PSEEN1762
Name: guaD
Funciton: Guanine deaminase (EC 3.5.4.3)
xdhA-xdhB-xdhC-guaD -95 5.9 TCTTGACCCAAAGGTCAGAA PSEEN1765
-72 5.3 TATTGACCACAAGGTCAGGC
Pseudomonas fluorescens Pf-5
Position: -99
Score: 4.69346
Sequence: TCCTGACCTTGAAGTCAGAA
Position: -76
Score: 5.05284
Sequence: CATTGACCGAAAAGTCAGAC
Locus tag: PFL_1889
Name: xdhA
Funciton: Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A (1.17.1.4)
Locus tag: PFL_1888
Name: xdhB
Funciton: Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4)
Locus tag: PFL_1887
Name: xdhC
Funciton: XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase)
Locus tag: PFL_1886
Name: guaD
Funciton: Guanine deaminase (EC 3.5.4.3)
xdhA-xdhB-xdhC-guaD -99 4.7 TCCTGACCTTGAAGTCAGAA PFL_1889
-76 5.1 CATTGACCGAAAAGTCAGAC
Pseudomonas mendocina ymp
Position: -146
Score: 4.56974
Sequence: AGCTGACCACAGGGTCAAAT
Position: -123
Score: 5.941
Sequence: TGTTGACCCAAAAGTCAGAA
Locus tag: Pmen_2751
Name: xdhA
Funciton: Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A (1.17.1.4)
Locus tag: Pmen_2752
Name: xdhB
Funciton: Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4)
Locus tag: Pmen_2753
Name: xdhC
Funciton: XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase)
Locus tag: Pmen_2754
Name: guaD
Funciton: Guanine deaminase (EC 3.5.4.3)
xdhA-xdhB-xdhC-guaD -146 4.6 AGCTGACCACAGGGTCAAAT Pmen_2751
-123 5.9 TGTTGACCCAAAAGTCAGAA
Pseudomonas putida KT2440
Position: -93
Score: 5.24233
Sequence: TCTTGACCCTTGAGTCAGAA
Position: -70
Score: 4.73413
Sequence: TATTGACCTGCTAGACAGGT
Locus tag: PP4278
Name: xdhA
Funciton: Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A (1.17.1.4)
Locus tag: PP4279
Name: xdhB
Funciton: Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4)
Locus tag: PP4280
Name: xdhC
Funciton: XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase)
Locus tag: PP4281
Name: guaD
Funciton: Guanine deaminase (EC 3.5.4.3)
xdhA-xdhB-xdhC-guaD -93 5.2 TCTTGACCCTTGAGTCAGAA PP4278
-70 4.7 TATTGACCTGCTAGACAGGT
Pseudomonas stutzeri A1501
Position: -234
Score: 4.22533
Sequence: CATTGACTTTTGAGTCAGGA
Position: -211
Score: 5.7942
Sequence: AGTTGACCGAAAAGTCAGAT
Locus tag: PST_3081
Name: xdhA
Funciton: Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A (1.17.1.4)
Locus tag: PST_3082
Name: xdhB
Funciton: Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4)
Locus tag: PST_3083
Name: xdhC
Funciton: XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase)
Locus tag: PST_3084
Name: guaD
Funciton: Guanine deaminase (EC 3.5.4.3)
xdhA-xdhB-xdhC-guaD -234 4.2 CATTGACTTTTGAGTCAGGA PST_3081
-211 5.8 AGTTGACCGAAAAGTCAGAT
Pseudomonas syringae pv. tomato str. DC3000
Position: -95
Score: 4.60453
Sequence: TCCTGACTTAAGAGTCAGAA
Position: -72
Score: 4.53371
Sequence: AATTGACCCAATTGGCAGAG
Locus tag: PSPTO3660
Name: xdhA
Funciton: Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A (1.17.1.4)
Locus tag: PSPTO3661
Name: xdhB
Funciton: Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4)
Locus tag: PSPTO3662
Name: xdhC
Funciton: XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase)
Locus tag: PSPTO3663
Name: guaD
Funciton: Guanine deaminase (EC 3.5.4.3)
xdhA-xdhB-xdhC-guaD -95 4.6 TCCTGACTTAAGAGTCAGAA PSPTO3660
-72 4.5 AATTGACCCAATTGGCAGAG
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