Orthologous regulated operons containing rutR gene
| Regulog: | RutR - Oceanospirillales/Alteromonadales |
| Regulator type: | Transcription factor |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Pyrimidine utilization |
| Effector: | Uracil |
| Phylum: | Proteobacteria/gamma |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Cellvibrio japonicus Ueda107 | ||||
|
Position: -165
Score: 4.51594 Sequence: GACTGGCCAAATAGACAATT
Position: -41
Score: 4.42269 Sequence: TTTTGTCCGTGCAGTCAGGT
Locus tag: CJA_0545
Name: ppuA Funciton: Predicted ABC transporter, ATP-binding protein
Locus tag: CJA_0544
Name: ppuC Funciton: Predicted ABC transporter, permease protein
Locus tag: CJA_0543
Name: ppuD Funciton: Predicted ABC transporter, inner membrane protein precursor
Locus tag: CJA_0542
Name: ppuB Funciton: Predicted ABC transporter, substrate-binding protein precursor
Locus tag: CJA_0541
Name: rutR Funciton: Transcriptional regulator RutR of pyrimidine catabolism, TetR family
Locus tag: CJA_0540
Name: ssnA Funciton: Predicted chlorohydrolase/aminohydrolase |
||||
| ppuA-ppuC-ppuD-ppuB-rutR-ssnA | -165 | 4.5 | GACTGGCCAAATAGACAATT | CJA_0545 |
| -41 | 4.4 | TTTTGTCCGTGCAGTCAGGT | ||
| Chromohalobacter salexigens DSM 3043 | ||||
|
Position: -87
Score: 4.98392 Sequence: GTATGACCATCTGGTCAACT
Locus tag: Csal_1790
Name: rutR Funciton: Transcriptional regulator RutR of pyrimidine catabolism, TetR family |
||||
| rutR | -87 | 5 | GTATGACCATCTGGTCAACT | Csal_1790 |
| Hahella chejuensis KCTC 2396 | ||||
|
Position: -235
Score: 5.2023 Sequence: AGTTGATCAATTGGTCAAAT
Position: -208
Score: 5.03013 Sequence: AACTGACCAGTTGGCCAAAA
Locus tag: HCH_01101
Name: ppuA Funciton: Predicted ABC transporter, ATP-binding protein
Locus tag: HCH_01102
Name: ppuC Funciton: Predicted ABC transporter, permease protein
Locus tag: HCH_01103
Name: ppuD Funciton: Predicted ABC transporter, inner membrane protein precursor
Locus tag: HCH_01105
Name: ppuB Funciton: Predicted ABC transporter, substrate-binding protein precursor
Locus tag: HCH_01106
Name: ssnA Funciton: Predicted chlorohydrolase/aminohydrolase
Locus tag: HCH_01108
Name: rutR Funciton: Transcriptional regulator RutR of pyrimidine catabolism, TetR family |
||||
| ppuA-ppuC-ppuD-ppuB-ssnA-rutR | -235 | 5.2 | AGTTGATCAATTGGTCAAAT | HCH_01101 |
| -208 | 5 | AACTGACCAGTTGGCCAAAA | ||
| Marinobacter sp. ELB17 | ||||
|
Position: -240
Score: 5.32593 Sequence: ACCTGACCAAATAGTCTAGT
Locus tag: MELB17_16803
Name: rutR Funciton: Transcriptional regulator RutR of pyrimidine catabolism, TetR family |
||||
| rutR | -240 | 5.3 | ACCTGACCAAATAGTCTAGT | MELB17_16803 |
| Teredinibacter turnerae T7901 | ||||
|
Position: -235
Score: 5.31474 Sequence: AGCTGGCCATTCGGTCAGGT
Position: -72
Score: 4.57341 Sequence: ATTTGTCCTAGTGGTCAAAT
Locus tag: TERTU_2069
Name: rutR Funciton: Transcriptional regulator RutR of pyrimidine catabolism, TetR family
Locus tag: TERTU_2070
Name: ssnA Funciton: Predicted chlorohydrolase/aminohydrolase |
||||
| rutR-ssnA | -235 | 5.3 | AGCTGGCCATTCGGTCAGGT | TERTU_2069 |
| -72 | 4.6 | ATTTGTCCTAGTGGTCAAAT | ||