Orthologous regulated operons containing rhiA gene

Properties
Regulog:	KdgR - Enterobacteriales
Regulator type:	Transcription factor
Regulator family:	IclR
Regulation mode:	repressor (activator)
Biological process:	Pectin and polygalacturonate utlization
Effector:	2-keto-3-deoxygluconate
Phylum:	Proteobacteria/gamma

Built upon 159 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Citrobacter koseri ATCC BAA-895
Position: -138 Score: 5.08341 Sequence: TTTTAAACCATCGTTTCAATT Position: -50 Score: 4.82111 Sequence: AACTAAAACAATGTTTTAACG Locus tag: CKO_04899 Name: rhiA Funciton: predicted rhamnogalacturonide TRAP transporter, substrate-binding subunit
rhiA	-138	5.1	TTTTAAACCATCGTTTCAATT	CKO_04899
	-50	4.8	AACTAAAACAATGTTTTAACG
Enterobacter sp. 638
Position: -134 Score: 4.5088 Sequence: TTTCAAACCATCGTTTCAAAA Position: -49 Score: 4.79435 Sequence: AACTAAAACAACGTTTTAACG Locus tag: Ent638_3876 Name: rhiA Funciton: predicted rhamnogalacturonide TRAP transporter, substrate-binding subunit Locus tag: Ent638_3875 Name: rhiB Funciton: predicted rhamnogalacturonide TRAP transporter, small transmembrane subunit Locus tag: Ent638_3874 Name: rhiC Funciton: predicted rhamnogalacturonide TRAP transporter, large transmembrane subunit
rhiA-rhiB-rhiC	-134	4.5	TTTCAAACCATCGTTTCAAAA	Ent638_3876
	-49	4.8	AACTAAAACAACGTTTTAACG
Erwinia carotovora subsp. atroseptica SCRI1043
Position: -239 Score: 5.58887 Sequence: ATATAAAACAGCATTTCATAT Locus tag: ECA0357 Name: rhiA Funciton: predicted rhamnogalacturonide TRAP transporter, substrate-binding subunit
rhiA	-239	5.6	ATATAAAACAGCATTTCATAT	ECA0357
Salmonella typhimurium LT2
Position: -126 Score: 4.71378 Sequence: ATGTGAAACAGGGTTTCAAAA Locus tag: STM4054 Name: rhiA Funciton: predicted rhamnogalacturonide TRAP transporter, substrate-binding subunit Locus tag: STM4053 Name: rhiB Funciton: predicted rhamnogalacturonide TRAP transporter, small transmembrane subunit Locus tag: STM4052 Name: rhiC Funciton: predicted rhamnogalacturonide TRAP transporter, large transmembrane subunit
rhiA-rhiB-rhiC	-126	4.7	ATGTGAAACAGGGTTTCAAAA	STM4054