Orthologous regulated operons containing rhiN gene

Properties
Regulog:	KdgR - Enterobacteriales
Regulator type:	Transcription factor
Regulator family:	IclR
Regulation mode:	repressor (activator)
Biological process:	Pectin and polygalacturonate utlization
Effector:	2-keto-3-deoxygluconate
Phylum:	Proteobacteria/gamma

Built upon 159 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Citrobacter koseri ATCC BAA-895
Position: -190 Score: 5.41818 Sequence: AATAGAAACGCTGTTTTATAA Locus tag: CKO_01081 Name: rhiT Funciton: Rhamnogalacturonide transporter Locus tag: CKO_01082 Name: rhiN Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
rhiT-rhiN	-190	5.4	AATAGAAACGCTGTTTTATAA	CKO_01081
Enterobacter sp. 638
Position: -189 Score: 5.60112 Sequence: AAAAGAAACGCTGTTTTATAA Locus tag: Ent638_2444 Name: rhiT Funciton: Rhamnogalacturonide transporter Locus tag: Ent638_2443 Name: rhiN Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
rhiT-rhiN	-189	5.6	AAAAGAAACGCTGTTTTATAA	Ent638_2444
Erwinia carotovora subsp. atroseptica SCRI1043
Position: -167 Score: 4.66061 Sequence: AGTTAAAATGCCTTTTTATAA Locus tag: ECA3560 Name: rhiT Funciton: Rhamnogalacturonide transporter Locus tag: ECA3559 Name: rhiN Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
rhiT-rhiN	-167	4.7	AGTTAAAATGCCTTTTTATAA	ECA3560
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Position: -200 Score: 4.94227 Sequence: AAGAGAAATGCTGTTTTATAA Locus tag: KPN_02390 Name: rhiT Funciton: Rhamnogalacturonide transporter Locus tag: KPN_02389 Name: rhiN Funciton: Rhamnogalacturonyl hydrolase (EC 3.2.1.172)
rhiT-rhiN	-200	4.9	AAGAGAAATGCTGTTTTATAA	KPN_02390

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --