Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing kduD gene

Properties
Regulog: KdgR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: IclR
Regulation mode: repressor (activator)
Biological process: Pectin and polygalacturonate utlization
Effector: 2-keto-3-deoxygluconate
Phylum: Proteobacteria/gamma
Built upon 159 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Citrobacter koseri ATCC BAA-895
Position: -119
Score: 6.231
Sequence: AAATGAAACAACGTTTTATTT
Position: -51
Score: 4.39485
Sequence: AAACGGAACGGTGTTTCGCCT
Locus tag: CKO_04220
Name: kduI
Funciton: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)
Locus tag: CKO_04219
Name: kduD
Funciton: 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)
kduI-kduD -119 6.2 AAATGAAACAACGTTTTATTT CKO_04220
-51 4.4 AAACGGAACGGTGTTTCGCCT
Edwardsiella tarda EIB202
Position: -129
Score: 5.57573
Sequence: AATCAAAACAGCATTTCATTT
Locus tag: ETAE_1898
Name: kduI
Funciton: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)
Locus tag: ETAE_1899
Name: kduD
Funciton: 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)
kduI-kduD -129 5.6 AATCAAAACAGCATTTCATTT ETAE_1898
Enterobacter sp. 638
Position: -127
Score: 5.40034
Sequence: AACTGAAACAACGTTTTAAAT
Position: -60
Score: 4.97537
Sequence: AATCGGAACATTGTTTCGTTA
Locus tag: Ent638_3296
Name: kduI
Funciton: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)
Locus tag: Ent638_3295
Name: kduD
Funciton: 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)
kduI-kduD -127 5.4 AACTGAAACAACGTTTTAAAT Ent638_3296
-60 5 AATCGGAACATTGTTTCGTTA
Erwinia carotovora subsp. atroseptica SCRI1043
Position: -209
Score: 6.08823
Sequence: AAATAAAACATTATTTCATTT
Locus tag: ECA2400
Name: kduI
Funciton: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)
Locus tag: ECA2401
Name: kduD
Funciton: 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)
kduI-kduD -209 6.1 AAATAAAACATTATTTCATTT ECA2400
Escherichia coli str. K-12 substr. MG1655
Position: -130
Score: 6.25775
Sequence: AAATGAAACATTGTTTTATTT
Position: -63
Score: 5.4325
Sequence: AAACGAAACAGTGTTTCACTA
Locus tag: b2843
Name: kduI
Funciton: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)
Locus tag: b2842
Name: kduD
Funciton: 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)
kduI-kduD -130 6.3 AAATGAAACATTGTTTTATTT b2843
-63 5.4 AAACGAAACAGTGTTTCACTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Position: -207
Score: 5.83027
Sequence: AAATGAAACATCGTTTTAAAT
Position: -139
Score: 5.15902
Sequence: AAACGGAACTCTGTTTTATTT
Locus tag: KPN_03265
Name: kduD
Funciton: 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)
kduD -207 5.8 AAATGAAACATCGTTTTAAAT KPN_03265
-139 5.2 AAACGGAACTCTGTTTTATTT
Salmonella typhimurium LT2
Position: -123
Score: 6.231
Sequence: AAATGAAACGTTGTTTTATTT
Position: -58
Score: 5.26534
Sequence: AATCAAAACAGTGTTTTGATT
Locus tag: STM3018
Name: kduI
Funciton: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)
Locus tag: STM3017
Name: kduD
Funciton: 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)
kduI-kduD -123 6.2 AAATGAAACGTTGTTTTATTT STM3018
-58 5.3 AATCAAAACAGTGTTTTGATT
Yersinia pestis KIM
Position: -201
Score: 5.97045
Sequence: TAATAAAACATCATTTCATTT
Locus tag: y1887
Name: kduI
Funciton: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)
Locus tag: y1886
Name: kduD
Funciton: 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)
kduI-kduD -201 6 TAATAAAACATCATTTCATTT y1887
© 2009-2020 RegPrecise