Orthologous regulated operons containing pydC gene
| Regulog: | RutR - Rhizobiales |
| Regulator type: | Transcription factor |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Pyrimidine utilization |
| Effector: | Uracil |
| Phylum: | Proteobacteria/alpha |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Agrobacterium tumefaciens str. C58 (Cereon) | ||||
|
Position: -145
Score: 5.19787 Sequence: TGTTTACCAGCCGGTCAATT
Locus tag: Atu2385
Name: pydC Funciton: Beta-ureidopropionase (EC 3.5.1.6)
Locus tag: Atu2386
Name: pydB Funciton: Dihydropyrimidinase (EC 3.5.2.2)
Locus tag: Atu2387
Name: Atu2387 Funciton: NTP pyrophosphohydrolase, MutT family
Locus tag: Atu2388
Name: pytA Funciton: Pyrimidine ABC transporter ATP-binding protein
Locus tag: Atu2389
Name: pytB Funciton: Pyrimidine ABC transporter, permease protein 1
Locus tag: Atu2390
Name: pytC Funciton: Pyrimidine ABC transporter, permease protein 2
Locus tag: Atu2391
Name: pytD Funciton: Pyrimidine ABC transporter, substrate-binding protein |
||||
| pydC-pydB-Atu2387-pytA-pytB-pytC-pytD | -145 | 5.2 | TGTTTACCAGCCGGTCAATT | Atu2385 |
| Bradyrhizobium sp. BTAi1 | ||||
|
Position: -136
Score: 5.05638 Sequence: ATCTGATCAAATGGTCAAAT
Locus tag: BBta_6033
Name: pytA Funciton: Pyrimidine ABC transporter ATP-binding protein
Locus tag: BBta_6032
Name: pytB Funciton: Pyrimidine ABC transporter, permease protein 1
Locus tag: BBta_6031
Name: pytC Funciton: Pyrimidine ABC transporter, permease protein 2
Locus tag: BBta_6030
Name: pytD Funciton: Pyrimidine ABC transporter, substrate-binding protein
Locus tag: BBta_6029
Name: pydB Funciton: Dihydropyrimidinase (EC 3.5.2.2)
Locus tag: BBta_6028
Name: pydC Funciton: Beta-ureidopropionase (EC 3.5.1.6) |
||||
| pytA-pytB-pytC-pytD-pydB-pydC | -136 | 5.1 | ATCTGATCAAATGGTCAAAT | BBta_6033 |
| Brucella melitensis 16M | ||||
|
Position: -148
Score: 5.09773 Sequence: TTTTGACCAACTAGTCAAGT
Locus tag: BMEI1643
Name: pydC Funciton: Beta-ureidopropionase (EC 3.5.1.6)
Locus tag: BMEI1644
Name: pydB Funciton: Dihydropyrimidinase (EC 3.5.2.2) |
||||
| pydC-pydB | -148 | 5.1 | TTTTGACCAACTAGTCAAGT | BMEI1643 |
| Mesorhizobium loti MAFF303099 | ||||
|
Position: -96
Score: 5.33527 Sequence: GTTTGTCCAATCGGTCAAAA
Locus tag: mll1632
Name: praX Funciton: Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18)
Locus tag: mll1631
Name: pydC Funciton: Beta-ureidopropionase (EC 3.5.1.6)
Locus tag: mll1629
Name: pydB Funciton: Dihydropyrimidinase (EC 3.5.2.2) |
||||
| praX-pydC-pydB | -96 | 5.3 | GTTTGTCCAATCGGTCAAAA | mll1632 |
| Mesorhizobium sp. BNC1 | ||||
|
Position: -88
Score: 4.94419 Sequence: GATTGTCCAAACGGTCAAAA
Locus tag: Meso_2042
Name: praX Funciton: Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18)
Locus tag: Meso_2043
Name: pydC Funciton: Beta-ureidopropionase (EC 3.5.1.6)
Locus tag: Meso_2044
Name: pytA Funciton: Pyrimidine ABC transporter ATP-binding protein
Locus tag: Meso_2045
Name: pytB Funciton: Pyrimidine ABC transporter, permease protein 1
Locus tag: Meso_2046
Name: pytC Funciton: Pyrimidine ABC transporter, permease protein 2
Locus tag: Meso_2047
Name: pytD Funciton: Pyrimidine ABC transporter, substrate-binding protein |
||||
| praX-pydC-pytA-pytB-pytC-pytD | -88 | 4.9 | GATTGTCCAAACGGTCAAAA | Meso_2042 |
| Rhizobium etli CFN 42 | ||||
|
Position: -156
Score: 5.58419 Sequence: TGTTTACCAATCGGTCAAAT
Locus tag: RHE_CH03290
Name: pydC Funciton: Beta-ureidopropionase (EC 3.5.1.6)
Locus tag: RHE_CH03291
Name: RL3717 Funciton: Hypothetical protein
Locus tag: RHE_CH03292
Name: pydB Funciton: Dihydropyrimidinase (EC 3.5.2.2) |
||||
| pydC-RL3717-pydB | -156 | 5.6 | TGTTTACCAATCGGTCAAAT | RHE_CH03290 |
| Rhizobium leguminosarum bv. viciae 3841 | ||||
|
Position: -159
Score: 5.58419 Sequence: TGTTTACCAATCGGTCAAAT
Locus tag: RL3716
Name: pydC Funciton: Beta-ureidopropionase (EC 3.5.1.6)
Locus tag: RL3717
Name: RL3717 Funciton: Hypothetical protein
Locus tag: RL3718
Name: pydB Funciton: Dihydropyrimidinase (EC 3.5.2.2) |
||||
| pydC-RL3717-pydB | -159 | 5.6 | TGTTTACCAATCGGTCAAAT | RL3716 |
| Rhizobium sp. NGR234 | ||||
|
Position: -147
Score: 5.51835 Sequence: TGTTTACCAACCGGTCAAAT
Locus tag: NGR_c24830
Name: pydC Funciton: Beta-ureidopropionase (EC 3.5.1.6)
Locus tag: NGR_c24840
Name: pydB Funciton: Dihydropyrimidinase (EC 3.5.2.2) |
||||
| pydC-pydB | -147 | 5.5 | TGTTTACCAACCGGTCAAAT | NGR_c24830 |
| Sinorhizobium meliloti 1021 | ||||
|
Position: -145
Score: 5.51835 Sequence: TGTTTACCAACCGGTCAAAT
Locus tag: SMc01820
Name: pydC Funciton: Beta-ureidopropionase (EC 3.5.1.6)
Locus tag: SMc01821
Name: pydB Funciton: Dihydropyrimidinase (EC 3.5.2.2) |
||||
| pydC-pydB | -145 | 5.5 | TGTTTACCAACCGGTCAAAT | SMc01820 |