Orthologous regulated operons containing nrdB gene
| Regulog: | NrdR - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | NrdR |
| Regulation mode: | repressor |
| Biological process: | Deoxyribonucleotide biosynthesis |
| Effector: | Deoxyribonucleotides |
| Phylum: | Proteobacteria/gamma |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Shewanella amazonensis SB2B | ||||
|
Position: -126
Score: 3.66418 Sequence: CCTCACTATCTTGTAT
Position: -95
Score: 4.43953 Sequence: GCACCATATCTTGTGT
Locus tag: Sama_1728
Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Sama_1727
Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: Sama_1726
Name: SO2417 Funciton: Ferredoxin |
||||
| nrdA-nrdB-SO2417 | -126 | 3.7 | CCTCACTATCTTGTAT | Sama_1728 |
| -95 | 4.4 | GCACCATATCTTGTGT | ||
| Shewanella baltica OS155 | ||||
|
Position: -203
Score: 3.66418 Sequence: CCTCACTATCTTGTAT
Position: -172
Score: 4.9526 Sequence: ACACCATATCTTGTGT
Locus tag: Sbal_2059
Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Sbal_2058
Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: Sbal_2057
Name: SO2417 Funciton: Ferredoxin |
||||
| nrdA-nrdB-SO2417 | -203 | 3.7 | CCTCACTATCTTGTAT | Sbal_2059 |
| -172 | 5 | ACACCATATCTTGTGT | ||
| Shewanella denitrificans OS217 | ||||
|
Position: -336
Score: 3.66418 Sequence: ACTCACTATCTTGTAG
Position: -304
Score: 5.35566 Sequence: ACACTATATCTTGTGT
Locus tag: Sden_1952
Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Sden_1953
Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: Sden_1954
Name: SO2417 Funciton: Ferredoxin |
||||
| nrdA-nrdB-SO2417 | -336 | 3.7 | ACTCACTATCTTGTAG | Sden_1952 |
| -304 | 5.4 | ACACTATATCTTGTGT | ||
| Shewanella frigidimarina NCIMB 400 | ||||
|
Position: -254
Score: 3.66418 Sequence: CCTCACTATCTTGTAT
Position: -223
Score: 4.9526 Sequence: ACACCATATCTTGTGT
Locus tag: Sfri_2133
Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Sfri_2134
Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: Sfri_2135
Name: SO2417 Funciton: Ferredoxin |
||||
| nrdA-nrdB-SO2417 | -254 | 3.7 | CCTCACTATCTTGTAT | Sfri_2133 |
| -223 | 5 | ACACCATATCTTGTGT | ||
| Shewanella halifaxensis HAW-EB4 | ||||
|
Position: -165
Score: 5.21242 Sequence: ACACCATATATAGTGT
Position: -163
Score: 4.15078 Sequence: ACCATATATAGTGTGT
Locus tag: Shal_2036
Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Shal_2035
Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: Shal_2034
Name: SO2417 Funciton: Ferredoxin |
||||
| nrdA-nrdB-SO2417 | -165 | 5.2 | ACACCATATATAGTGT | Shal_2036 |
| -163 | 4.2 | ACCATATATAGTGTGT | ||
| Shewanella loihica PV-4 | ||||
|
Position: -180
Score: 3.66418 Sequence: CCTCACTATCTTGTAT
Position: -149
Score: 4.9526 Sequence: ACACCATATCTTGTGT
Locus tag: Shew_1946
Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Shew_1945
Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: Shew_1944
Name: SO2417 Funciton: Ferredoxin |
||||
| nrdA-nrdB-SO2417 | -180 | 3.7 | CCTCACTATCTTGTAT | Shew_1946 |
| -149 | 5 | ACACCATATCTTGTGT | ||
| Shewanella oneidensis MR-1 | ||||
|
Position: -202
Score: 3.66418 Sequence: CCTCACTATCTTGTAT
Position: -171
Score: 4.9526 Sequence: ACACCATATCTTGTGT
Locus tag: SO2415
Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: SO2416
Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: SO2417
Name: SO2417 Funciton: Ferredoxin |
||||
| nrdA-nrdB-SO2417 | -202 | 3.7 | CCTCACTATCTTGTAT | SO2415 |
| -171 | 5 | ACACCATATCTTGTGT | ||
| Shewanella pealeana ATCC 700345 | ||||
|
Position: -165
Score: 5.21242 Sequence: ACACCATATATAGTGT
Position: -163
Score: 4.15078 Sequence: ACCATATATAGTGTGT
Locus tag: Spea_2064
Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Spea_2063
Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: Spea_2062
Name: SO2417 Funciton: Ferredoxin |
||||
| nrdA-nrdB-SO2417 | -165 | 5.2 | ACACCATATATAGTGT | Spea_2064 |
| -163 | 4.2 | ACCATATATAGTGTGT | ||
| Shewanella piezotolerans WP3 | ||||
|
Position: -50
Score: 3.91098 Sequence: AAACACCATATATTGT
Position: -48
Score: 5.11547 Sequence: ACACCATATATTGTGT
Locus tag: swp_2478
Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: swp_2476
Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: swp_2475
Name: SO2417 Funciton: Ferredoxin |
||||
| nrdA-nrdB-SO2417 | -50 | 3.9 | AAACACCATATATTGT | swp_2478 |
| -48 | 5.1 | ACACCATATATTGTGT | ||
| Shewanella putrefaciens CN-32 | ||||
|
Position: -202
Score: 3.66418 Sequence: CCTCACTATCTTGTAT
Position: -171
Score: 4.9526 Sequence: ACACCATATCTTGTGT
Locus tag: Sputcn32_2073
Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Sputcn32_2074
Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: Sputcn32_2075
Name: SO2417 Funciton: Ferredoxin |
||||
| nrdA-nrdB-SO2417 | -202 | 3.7 | CCTCACTATCTTGTAT | Sputcn32_2073 |
| -171 | 5 | ACACCATATCTTGTGT | ||
| Shewanella sediminis HAW-EB3 | ||||
|
Position: -164
Score: 5.21242 Sequence: ACACCATATATAGTGT
Position: -162
Score: 4.15078 Sequence: ACCATATATAGTGTGT
Locus tag: Ssed_2306
Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Ssed_2307
Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: Ssed_2308
Name: SO2417 Funciton: Ferredoxin |
||||
| nrdA-nrdB-SO2417 | -164 | 5.2 | ACACCATATATAGTGT | Ssed_2306 |
| -162 | 4.2 | ACCATATATAGTGTGT | ||
| Shewanella sp ANA-3 | ||||
|
Position: -202
Score: 3.66418 Sequence: CCTCACTATCTTGTAT
Position: -171
Score: 4.9526 Sequence: ACACCATATCTTGTGT
Locus tag: Shewana3_1969
Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Shewana3_1968
Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: Shewana3_1967
Name: SO2417 Funciton: Ferredoxin |
||||
| nrdA-nrdB-SO2417 | -202 | 3.7 | CCTCACTATCTTGTAT | Shewana3_1969 |
| -171 | 5 | ACACCATATCTTGTGT | ||
| Shewanella sp MR-4 | ||||
|
Position: -202
Score: 3.66418 Sequence: CCTCACTATCTTGTAT
Position: -171
Score: 4.9526 Sequence: ACACCATATCTTGTGT
Locus tag: Shewmr4_1916
Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Shewmr4_1915
Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: Shewmr4_1914
Name: SO2417 Funciton: Ferredoxin |
||||
| nrdA-nrdB-SO2417 | -202 | 3.7 | CCTCACTATCTTGTAT | Shewmr4_1916 |
| -171 | 5 | ACACCATATCTTGTGT | ||
| Shewanella sp MR-7 | ||||
|
Position: -202
Score: 3.66418 Sequence: CCTCACTATCTTGTAT
Position: -171
Score: 4.9526 Sequence: ACACCATATCTTGTGT
Locus tag: Shewmr7_2062
Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Shewmr7_2063
Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: Shewmr7_2064
Name: SO2417 Funciton: Ferredoxin |
||||
| nrdA-nrdB-SO2417 | -202 | 3.7 | CCTCACTATCTTGTAT | Shewmr7_2062 |
| -171 | 5 | ACACCATATCTTGTGT | ||
| Shewanella sp W3-18-1 | ||||
|
Position: -202
Score: 3.66418 Sequence: CCTCACTATCTTGTAT
Position: -171
Score: 4.9526 Sequence: ACACCATATCTTGTGT
Locus tag: Sputw3181_1939
Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Sputw3181_1938
Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: Sputw3181_1937
Name: SO2417 Funciton: Ferredoxin |
||||
| nrdA-nrdB-SO2417 | -202 | 3.7 | CCTCACTATCTTGTAT | Sputw3181_1939 |
| -171 | 5 | ACACCATATCTTGTGT | ||
| Shewanella woodyi ATCC 51908 | ||||
|
Position: -165
Score: 5.21242 Sequence: ACACCATATATAGTGT
Position: -163
Score: 4.15078 Sequence: ACCATATATAGTGTGT
Locus tag: Swoo_2303
Name: nrdA Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Swoo_2302
Name: nrdB Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: Swoo_2301
Name: SO2417 Funciton: Ferredoxin |
||||
| nrdA-nrdB-SO2417 | -165 | 5.2 | ACACCATATATAGTGT | Swoo_2303 |
| -163 | 4.2 | ACCATATATAGTGTGT | ||