Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing nrdB gene

Properties
Regulog: NrdR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: NrdR
Regulation mode: repressor
Biological process: Deoxyribonucleotide biosynthesis
Effector: Deoxyribonucleotides
Phylum: Proteobacteria/gamma
Built upon 64 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -126
Score: 3.66418
Sequence: CCTCACTATCTTGTAT
Position: -95
Score: 4.43953
Sequence: GCACCATATCTTGTGT
Locus tag: Sama_1728
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Sama_1727
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: Sama_1726
Name: SO2417
Funciton: Ferredoxin
nrdA-nrdB-SO2417 -126 3.7 CCTCACTATCTTGTAT Sama_1728
-95 4.4 GCACCATATCTTGTGT
Shewanella baltica OS155
Position: -203
Score: 3.66418
Sequence: CCTCACTATCTTGTAT
Position: -172
Score: 4.9526
Sequence: ACACCATATCTTGTGT
Locus tag: Sbal_2059
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Sbal_2058
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: Sbal_2057
Name: SO2417
Funciton: Ferredoxin
nrdA-nrdB-SO2417 -203 3.7 CCTCACTATCTTGTAT Sbal_2059
-172 5 ACACCATATCTTGTGT
Shewanella denitrificans OS217
Position: -336
Score: 3.66418
Sequence: ACTCACTATCTTGTAG
Position: -304
Score: 5.35566
Sequence: ACACTATATCTTGTGT
Locus tag: Sden_1952
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Sden_1953
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: Sden_1954
Name: SO2417
Funciton: Ferredoxin
nrdA-nrdB-SO2417 -336 3.7 ACTCACTATCTTGTAG Sden_1952
-304 5.4 ACACTATATCTTGTGT
Shewanella frigidimarina NCIMB 400
Position: -254
Score: 3.66418
Sequence: CCTCACTATCTTGTAT
Position: -223
Score: 4.9526
Sequence: ACACCATATCTTGTGT
Locus tag: Sfri_2133
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Sfri_2134
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: Sfri_2135
Name: SO2417
Funciton: Ferredoxin
nrdA-nrdB-SO2417 -254 3.7 CCTCACTATCTTGTAT Sfri_2133
-223 5 ACACCATATCTTGTGT
Shewanella halifaxensis HAW-EB4
Position: -165
Score: 5.21242
Sequence: ACACCATATATAGTGT
Position: -163
Score: 4.15078
Sequence: ACCATATATAGTGTGT
Locus tag: Shal_2036
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Shal_2035
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: Shal_2034
Name: SO2417
Funciton: Ferredoxin
nrdA-nrdB-SO2417 -165 5.2 ACACCATATATAGTGT Shal_2036
-163 4.2 ACCATATATAGTGTGT
Shewanella loihica PV-4
Position: -180
Score: 3.66418
Sequence: CCTCACTATCTTGTAT
Position: -149
Score: 4.9526
Sequence: ACACCATATCTTGTGT
Locus tag: Shew_1946
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Shew_1945
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: Shew_1944
Name: SO2417
Funciton: Ferredoxin
nrdA-nrdB-SO2417 -180 3.7 CCTCACTATCTTGTAT Shew_1946
-149 5 ACACCATATCTTGTGT
Shewanella oneidensis MR-1
Position: -202
Score: 3.66418
Sequence: CCTCACTATCTTGTAT
Position: -171
Score: 4.9526
Sequence: ACACCATATCTTGTGT
Locus tag: SO2415
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: SO2416
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: SO2417
Name: SO2417
Funciton: Ferredoxin
nrdA-nrdB-SO2417 -202 3.7 CCTCACTATCTTGTAT SO2415
-171 5 ACACCATATCTTGTGT
Shewanella pealeana ATCC 700345
Position: -165
Score: 5.21242
Sequence: ACACCATATATAGTGT
Position: -163
Score: 4.15078
Sequence: ACCATATATAGTGTGT
Locus tag: Spea_2064
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Spea_2063
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: Spea_2062
Name: SO2417
Funciton: Ferredoxin
nrdA-nrdB-SO2417 -165 5.2 ACACCATATATAGTGT Spea_2064
-163 4.2 ACCATATATAGTGTGT
Shewanella piezotolerans WP3
Position: -50
Score: 3.91098
Sequence: AAACACCATATATTGT
Position: -48
Score: 5.11547
Sequence: ACACCATATATTGTGT
Locus tag: swp_2478
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: swp_2476
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: swp_2475
Name: SO2417
Funciton: Ferredoxin
nrdA-nrdB-SO2417 -50 3.9 AAACACCATATATTGT swp_2478
-48 5.1 ACACCATATATTGTGT
Shewanella putrefaciens CN-32
Position: -202
Score: 3.66418
Sequence: CCTCACTATCTTGTAT
Position: -171
Score: 4.9526
Sequence: ACACCATATCTTGTGT
Locus tag: Sputcn32_2073
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Sputcn32_2074
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: Sputcn32_2075
Name: SO2417
Funciton: Ferredoxin
nrdA-nrdB-SO2417 -202 3.7 CCTCACTATCTTGTAT Sputcn32_2073
-171 5 ACACCATATCTTGTGT
Shewanella sediminis HAW-EB3
Position: -164
Score: 5.21242
Sequence: ACACCATATATAGTGT
Position: -162
Score: 4.15078
Sequence: ACCATATATAGTGTGT
Locus tag: Ssed_2306
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Ssed_2307
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: Ssed_2308
Name: SO2417
Funciton: Ferredoxin
nrdA-nrdB-SO2417 -164 5.2 ACACCATATATAGTGT Ssed_2306
-162 4.2 ACCATATATAGTGTGT
Shewanella sp ANA-3
Position: -202
Score: 3.66418
Sequence: CCTCACTATCTTGTAT
Position: -171
Score: 4.9526
Sequence: ACACCATATCTTGTGT
Locus tag: Shewana3_1969
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Shewana3_1968
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: Shewana3_1967
Name: SO2417
Funciton: Ferredoxin
nrdA-nrdB-SO2417 -202 3.7 CCTCACTATCTTGTAT Shewana3_1969
-171 5 ACACCATATCTTGTGT
Shewanella sp MR-4
Position: -202
Score: 3.66418
Sequence: CCTCACTATCTTGTAT
Position: -171
Score: 4.9526
Sequence: ACACCATATCTTGTGT
Locus tag: Shewmr4_1916
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Shewmr4_1915
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: Shewmr4_1914
Name: SO2417
Funciton: Ferredoxin
nrdA-nrdB-SO2417 -202 3.7 CCTCACTATCTTGTAT Shewmr4_1916
-171 5 ACACCATATCTTGTGT
Shewanella sp MR-7
Position: -202
Score: 3.66418
Sequence: CCTCACTATCTTGTAT
Position: -171
Score: 4.9526
Sequence: ACACCATATCTTGTGT
Locus tag: Shewmr7_2062
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Shewmr7_2063
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: Shewmr7_2064
Name: SO2417
Funciton: Ferredoxin
nrdA-nrdB-SO2417 -202 3.7 CCTCACTATCTTGTAT Shewmr7_2062
-171 5 ACACCATATCTTGTGT
Shewanella sp W3-18-1
Position: -202
Score: 3.66418
Sequence: CCTCACTATCTTGTAT
Position: -171
Score: 4.9526
Sequence: ACACCATATCTTGTGT
Locus tag: Sputw3181_1939
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Sputw3181_1938
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: Sputw3181_1937
Name: SO2417
Funciton: Ferredoxin
nrdA-nrdB-SO2417 -202 3.7 CCTCACTATCTTGTAT Sputw3181_1939
-171 5 ACACCATATCTTGTGT
Shewanella woodyi ATCC 51908
Position: -165
Score: 5.21242
Sequence: ACACCATATATAGTGT
Position: -163
Score: 4.15078
Sequence: ACCATATATAGTGTGT
Locus tag: Swoo_2303
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Swoo_2302
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
Locus tag: Swoo_2301
Name: SO2417
Funciton: Ferredoxin
nrdA-nrdB-SO2417 -165 5.2 ACACCATATATAGTGT Swoo_2303
-163 4.2 ACCATATATAGTGTGT
© 2009-2020 RegPrecise