Orthologous regulated operons containing nrdD gene
| Regulog: | NrdR - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | NrdR |
| Regulation mode: | repressor |
| Biological process: | Deoxyribonucleotide biosynthesis |
| Effector: | Deoxyribonucleotides |
| Phylum: | Proteobacteria/gamma |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Shewanella amazonensis SB2B | ||||
|
Position: -72
Score: 4.58685 Sequence: ACACTACATTTTGTAT
Position: -41
Score: 4.05811 Sequence: GCTCAACATATAGTGA
Locus tag: Sama_1275
Name: nrdD Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: Sama_1276
Name: nrdG Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
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| nrdD-nrdG | -72 | 4.6 | ACACTACATTTTGTAT | Sama_1275 |
| -41 | 4.1 | GCTCAACATATAGTGA | ||
| Shewanella baltica OS155 | ||||
|
Position: -80
Score: 4.38472 Sequence: GCTCTACATATTGTGT
Position: -49
Score: 5.02129 Sequence: TCACTAGATGTAGTGT
Locus tag: Sbal_1665
Name: nrdD Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: Sbal_1666
Name: nrdG Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
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| nrdD-nrdG | -80 | 4.4 | GCTCTACATATTGTGT | Sbal_1665 |
| -49 | 5 | TCACTAGATGTAGTGT | ||
| Shewanella denitrificans OS217 | ||||
|
Position: -124
Score: 4.13406 Sequence: GCACAGCATATTGTGT
Position: -93
Score: 3.60417 Sequence: AgtCTATATgTAGatT
Locus tag: Sden_1419
Name: nrdD Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: Sden_1420
Name: nrdG Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
||||
| nrdD-nrdG | -124 | 4.1 | GCACAGCATATTGTGT | Sden_1419 |
| -93 | 3.6 | AgtCTATATgTAGatT | ||
| Shewanella frigidimarina NCIMB 400 | ||||
|
Position: -64
Score: 4.6859 Sequence: ACACTCTATCTTGTGT
Position: -33
Score: 3.98243 Sequence: GCGCTATATATAGTGC
Locus tag: Sfri_2443
Name: nrdD Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: Sfri_2442
Name: nrdG Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
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| nrdD-nrdG | -64 | 4.7 | ACACTCTATCTTGTGT | Sfri_2443 |
| -33 | 4 | GCGCTATATATAGTGC | ||
| Shewanella halifaxensis HAW-EB4 | ||||
|
Position: -81
Score: 4.07724 Sequence: ACGCCACATATTGTGA
Position: -50
Score: 5.10242 Sequence: GCACTATATATAGTGT
Locus tag: Shal_2692
Name: nrdD Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: Shal_2691
Name: nrdG Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
||||
| nrdD-nrdG | -81 | 4.1 | ACGCCACATATTGTGA | Shal_2692 |
| -50 | 5.1 | GCACTATATATAGTGT | ||
| Shewanella loihica PV-4 | ||||
|
Position: -80
Score: 4.29385 Sequence: GCGCTACATATTGTGT
Position: -49
Score: 5.21242 Sequence: ACACTATATATGGTGT
Locus tag: Shew_2449
Name: nrdD Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: Shew_2448
Name: nrdG Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
||||
| nrdD-nrdG | -80 | 4.3 | GCGCTACATATTGTGT | Shew_2449 |
| -49 | 5.2 | ACACTATATATGGTGT | ||
| Shewanella oneidensis MR-1 | ||||
|
Position: -79
Score: 4.34778 Sequence: TGCCTACATATTGTGT
Position: -48
Score: 5.18417 Sequence: TCACTATATGTAGTGT
Locus tag: SO2834
Name: nrdD Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: SO2833
Name: nrdG Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
||||
| nrdD-nrdG | -79 | 4.3 | TGCCTACATATTGTGT | SO2834 |
| -48 | 5.2 | TCACTATATGTAGTGT | ||
| Shewanella pealeana ATCC 700345 | ||||
|
Position: -81
Score: 3.56417 Sequence: gCgCcAcATATtGTGa
Position: -50
Score: 5.10242 Sequence: GCACTATATATAGTGT
Locus tag: Spea_2619
Name: nrdD Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: Spea_2618
Name: nrdG Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
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| nrdD-nrdG | -81 | 3.6 | gCgCcAcATATtGTGa | Spea_2619 |
| -50 | 5.1 | GCACTATATATAGTGT | ||
| Shewanella piezotolerans WP3 | ||||
|
Position: -80
Score: 3.56417 Sequence: gCgCcAcATATtGTGa
Position: -49
Score: 5.25456 Sequence: ATACTATATGTAGTGT
Locus tag: swp_3165
Name: nrdD Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: swp_3164
Name: nrdG Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
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| nrdD-nrdG | -80 | 3.6 | gCgCcAcATATtGTGa | swp_3165 |
| -49 | 5.3 | ATACTATATGTAGTGT | ||
| Shewanella putrefaciens CN-32 | ||||
|
Position: -79
Score: 4.39855 Sequence: ACGCTATATATTGTGC
Position: -48
Score: 5.18417 Sequence: TCACTATATGTAGTGT
Locus tag: Sputcn32_1540
Name: nrdD Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: Sputcn32_1541
Name: nrdG Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
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| nrdD-nrdG | -79 | 4.4 | ACGCTATATATTGTGC | Sputcn32_1540 |
| -48 | 5.2 | TCACTATATGTAGTGT | ||
| Shewanella sediminis HAW-EB3 | ||||
|
Position: -80
Score: 4.1969 Sequence: ACGCAACATATTGTGC
Position: -49
Score: 5.10772 Sequence: ACACTATATGTGGTGT
Locus tag: Ssed_1600
Name: nrdD Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: Ssed_1601
Name: nrdG Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
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| nrdD-nrdG | -80 | 4.2 | ACGCAACATATTGTGC | Ssed_1600 |
| -49 | 5.1 | ACACTATATGTGGTGT | ||
| Shewanella sp ANA-3 | ||||
|
Position: -79
Score: 4.28961 Sequence: TGCCTAGATATTGTGT
Position: -48
Score: 4.99771 Sequence: GCACTATATGTAGTGT
Locus tag: Shewana3_2603
Name: nrdD Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: Shewana3_2602
Name: nrdG Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
||||
| nrdD-nrdG | -79 | 4.3 | TGCCTAGATATTGTGT | Shewana3_2603 |
| -48 | 5 | GCACTATATGTAGTGT | ||
| Shewanella sp MR-4 | ||||
|
Position: -79
Score: 4.38656 Sequence: TGCCTAGATATAGTGT
Position: -48
Score: 5.51078 Sequence: ACACTATATGTAGTGT
Locus tag: Shewmr4_2441
Name: nrdD Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: Shewmr4_2440
Name: nrdG Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
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| nrdD-nrdG | -79 | 4.4 | TGCCTAGATATAGTGT | Shewmr4_2441 |
| -48 | 5.5 | ACACTATATGTAGTGT | ||
| Shewanella sp MR-7 | ||||
|
Position: -79
Score: 4.44473 Sequence: TGCCTACATATAGTGT
Position: -48
Score: 5.51078 Sequence: ACACTATATGTAGTGT
Locus tag: Shewmr7_2511
Name: nrdD Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: Shewmr7_2510
Name: nrdG Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
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| nrdD-nrdG | -79 | 4.4 | TGCCTACATATAGTGT | Shewmr7_2511 |
| -48 | 5.5 | ACACTATATGTAGTGT | ||
| Shewanella sp W3-18-1 | ||||
|
Position: -79
Score: 4.39855 Sequence: ACGCTATATATTGTGC
Position: -48
Score: 5.18417 Sequence: TCACTATATGTAGTGT
Locus tag: Sputw3181_2559
Name: nrdD Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: Sputw3181_2558
Name: nrdG Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
||||
| nrdD-nrdG | -79 | 4.4 | ACGCTATATATTGTGC | Sputw3181_2559 |
| -48 | 5.2 | TCACTATATGTAGTGT | ||
| Shewanella woodyi ATCC 51908 | ||||
|
Position: -80
Score: 4.1969 Sequence: ACGCAACATATTGTGC
Position: -49
Score: 5.10772 Sequence: ACACTATATGTGGTGT
Locus tag: Swoo_3049
Name: nrdD Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: Swoo_3048
Name: nrdG Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
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| nrdD-nrdG | -80 | 4.2 | ACGCAACATATTGTGC | Swoo_3049 |
| -49 | 5.1 | ACACTATATGTGGTGT | ||