Orthologous regulated operons containing deoA gene
| Regulog: | RutR - Rhizobiales |
| Regulator type: | Transcription factor |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Pyrimidine utilization |
| Effector: | Uracil |
| Phylum: | Proteobacteria/alpha |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Agrobacterium tumefaciens str. C58 (Cereon) | ||||
|
Position: -164
Score: 4.66015 Sequence: GTTTTTCCACCGGGTCAAAA
Locus tag: Atu0126
Name: pntD Funciton: Predicted nucleoside ABC transporter, substrate-binding protein
Locus tag: Atu0127
Name: pntA Funciton: Predicted nucleoside ABC transporter, ATP-binding protein
Locus tag: Atu0128
Name: pntB Funciton: Predicted nucleoside ABC transporter, permease protein 1
Locus tag: Atu0129
Name: pntC Funciton: Predicted nucleoside ABC transporter, permease protein 2
Locus tag: Atu0130
Name: cdd Funciton: Cytidine deaminase (EC 3.5.4.5)
Locus tag: Atu0131
Name: deoD Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1)
Locus tag: Atu0132
Name: deoC Funciton: Deoxyribose-phosphate aldolase (EC 4.1.2.4)
Locus tag: Atu0133
Name: deoA Funciton: Thymidine phosphorylase (EC 2.4.2.4) |
||||
| pntD-pntA-pntB-pntC-cdd-deoD-deoC-deoA | -164 | 4.7 | GTTTTTCCACCGGGTCAAAA | Atu0126 |
| Mesorhizobium loti MAFF303099 | ||||
|
Position: -41
Score: 5.57618 Sequence: TTTTGACCAAGCGATAAAAA
Locus tag: mlr3154
Name: pntA Funciton: Predicted nucleoside ABC transporter, ATP-binding protein
Locus tag: mlr3155
Name: pntB Funciton: Predicted nucleoside ABC transporter, permease protein 1
Locus tag: mlr3157
Name: pntC Funciton: Predicted nucleoside ABC transporter, permease protein 2
Locus tag: mlr3158
Name: cdd Funciton: Cytidine deaminase (EC 3.5.4.5)
Locus tag: mlr3159
Name: deoD Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1)
Locus tag: mlr3160
Name: deoA Funciton: Thymidine phosphorylase (EC 2.4.2.4) |
||||
| pntA-pntB-pntC-cdd-deoD-deoA | -41 | 5.6 | TTTTGACCAAGCGATAAAAA | mlr3154 |
| Mesorhizobium sp. BNC1 | ||||
|
Position: -18
Score: 5.26567 Sequence: TGTTGACCAAAAGATAAAAT
Locus tag: Meso_3652
Name: pntA Funciton: Predicted nucleoside ABC transporter, ATP-binding protein
Locus tag: Meso_3653
Name: pntB Funciton: Predicted nucleoside ABC transporter, permease protein 1
Locus tag: Meso_3654
Name: pntC Funciton: Predicted nucleoside ABC transporter, permease protein 2
Locus tag: Meso_3655
Name: cdd Funciton: Cytidine deaminase (EC 3.5.4.5)
Locus tag: Meso_3656
Name: deoD Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1)
Locus tag: Meso_3657
Name: deoA Funciton: Thymidine phosphorylase (EC 2.4.2.4) |
||||
| pntA-pntB-pntC-cdd-deoD-deoA | -18 | 5.3 | TGTTGACCAAAAGATAAAAT | Meso_3652 |
| Rhizobium etli CFN 42 | ||||
|
Position: -154
Score: 4.84007 Sequence: TCTTTACCGCCTGAAAAATT
Locus tag: RHE_CH00187
Name: pntD Funciton: Predicted nucleoside ABC transporter, substrate-binding protein
Locus tag: RHE_CH00188
Name: pntA Funciton: Predicted nucleoside ABC transporter, ATP-binding protein
Locus tag: RHE_CH00189
Name: pntB Funciton: Predicted nucleoside ABC transporter, permease protein 1
Locus tag: RHE_CH00190
Name: pntC Funciton: Predicted nucleoside ABC transporter, permease protein 2
Locus tag: RHE_CH00191
Name: cdd Funciton: Cytidine deaminase (EC 3.5.4.5)
Locus tag: RHE_CH00192
Name: deoD Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1)
Locus tag: RHE_CH00193
Name: deoC Funciton: Deoxyribose-phosphate aldolase (EC 4.1.2.4)
Locus tag: RHE_CH00194
Name: deoA Funciton: Thymidine phosphorylase (EC 2.4.2.4) |
||||
| pntD-pntA-pntB-pntC-cdd-deoD-deoC-deoA | -154 | 4.8 | TCTTTACCGCCTGAAAAATT | RHE_CH00187 |
| Rhizobium leguminosarum bv. viciae 3841 | ||||
|
Position: -155
Score: 5.11548 Sequence: TCTTTACCAGCTGAAAAATT
Locus tag: RL0196
Name: pntD Funciton: Predicted nucleoside ABC transporter, substrate-binding protein
Locus tag: RL0197
Name: pntA Funciton: Predicted nucleoside ABC transporter, ATP-binding protein
Locus tag: RL0198
Name: pntB Funciton: Predicted nucleoside ABC transporter, permease protein 1
Locus tag: RL0199
Name: pntC Funciton: Predicted nucleoside ABC transporter, permease protein 2
Locus tag: RL0200
Name: cdd Funciton: Cytidine deaminase (EC 3.5.4.5)
Locus tag: RL0201
Name: deoD Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1)
Locus tag: RL0202
Name: deoC Funciton: Deoxyribose-phosphate aldolase (EC 4.1.2.4)
Locus tag: RL0203
Name: deoA Funciton: Thymidine phosphorylase (EC 2.4.2.4) |
||||
| pntD-pntA-pntB-pntC-cdd-deoD-deoC-deoA | -155 | 5.1 | TCTTTACCAGCTGAAAAATT | RL0196 |
| Rhizobium sp. NGR234 | ||||
|
Position: -78
Score: 5.2582 Sequence: CTTATACCAAATGGTAAAAA
Locus tag: NGR_c34500
Name: pntA Funciton: Predicted nucleoside ABC transporter, ATP-binding protein
Locus tag: NGR_c34510
Name: pntB Funciton: Predicted nucleoside ABC transporter, permease protein 1
Locus tag: NGR_c34520
Name: pntC Funciton: Predicted nucleoside ABC transporter, permease protein 2
Locus tag: NGR_c34530
Name: cdd Funciton: Cytidine deaminase (EC 3.5.4.5)
Locus tag: NGR_c34540
Name: deoD Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1)
Locus tag: NGR_c34550
Name: deoA Funciton: Thymidine phosphorylase (EC 2.4.2.4) |
||||
| pntA-pntB-pntC-cdd-deoD-deoA | -78 | 5.3 | CTTATACCAAATGGTAAAAA | NGR_c34500 |
| Sinorhizobium meliloti 1021 | ||||
|
Position: -80
Score: 5.2582 Sequence: CTTATACCAAATGGTAAAAA
Locus tag: SMc04127
Name: pntA Funciton: Predicted nucleoside ABC transporter, ATP-binding protein
Locus tag: SMc04126
Name: pntB Funciton: Predicted nucleoside ABC transporter, permease protein 1
Locus tag: SMc04125
Name: pntC Funciton: Predicted nucleoside ABC transporter, permease protein 2
Locus tag: SMc04124
Name: cdd Funciton: Cytidine deaminase (EC 3.5.4.5)
Locus tag: SMc04123
Name: deoD Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1)
Locus tag: SMc04122
Name: deoA Funciton: Thymidine phosphorylase (EC 2.4.2.4) |
||||
| pntA-pntB-pntC-cdd-deoD-deoA | -80 | 5.3 | CTTATACCAAATGGTAAAAA | SMc04127 |