Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing nrdB gene

Properties
Regulog: NrdR - Comamonadaceae
Regulator type: Transcription factor
Regulator family: NrdR
Regulation mode: repressor
Biological process: Deoxyribonucleotide biosynthesis
Effector: Deoxyribonucleotides
Phylum: Proteobacteria/beta
Built upon 28 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Acidovorax avenae subsp. citrulli AAC00-1
Position: -128
Score: 5.78221
Sequence: ACACTACATGTAGTGC
Position: -96
Score: 4.99702
Sequence: CCACTACCTATAGCGT
Locus tag: Aave_0864
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Aave_0863
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
nrdA-nrdB -128 5.8 ACACTACATGTAGTGC Aave_0864
-96 5 CCACTACCTATAGCGT
Acidovorax sp. JS42
Position: -135
Score: 5.27415
Sequence: ACACTACCCCTAGTGT
Position: -103
Score: 5.85784
Sequence: ACACTAGATATAGTGT
Locus tag: Ajs_3632
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Ajs_3633
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
nrdA-nrdB -135 5.3 ACACTACCCCTAGTGT Ajs_3632
-103 5.9 ACACTAGATATAGTGT
Comamonas testosteroni KF-1
Position: -169
Score: 5.60555
Sequence: ACACTACCGGTAGTGT
Position: -138
Score: 5.19961
Sequence: ACCCCATATCTAGTGT
Locus tag: CtesDRAFT_3006
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: CtesDRAFT_3007
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
nrdA-nrdB -169 5.6 ACACTACCGGTAGTGT CtesDRAFT_3006
-138 5.2 ACCCCATATCTAGTGT
Delftia acidovorans SPH-1
Position: -172
Score: 5.53814
Sequence: ACACTACAGGTAGTGC
Position: -141
Score: 5.40635
Sequence: ACACCATATCTAGTGT
Locus tag: Daci_1501
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Daci_1500
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
nrdA-nrdB -172 5.5 ACACTACAGGTAGTGC Daci_1501
-141 5.4 ACACCATATCTAGTGT
Leptothrix cholodnii SP-6
Position: -322
Score: 5.19543
Sequence: ACACTAGCGCTAGTGC
Position: -291
Score: 5.42872
Sequence: GCACTAGATGTAGTGC
Locus tag: Lcho_0382
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Lcho_0383
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
nrdA-nrdB -322 5.2 ACACTAGCGCTAGTGC Lcho_0382
-291 5.4 GCACTAGATGTAGTGC
Methylibium petroleiphilum PM1
Position: -325
Score: 5.5918
Sequence: ACGCTACATATAGTGC
Position: -294
Score: 5.41569
Sequence: GCGCTAGATATAGTGT
Locus tag: Mpe_A3214
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Mpe_A3213
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
nrdA-nrdB -325 5.6 ACGCTACATATAGTGC Mpe_A3214
-294 5.4 GCGCTAGATATAGTGT
Polaromonas naphthalenivorans CJ2
Position: -190
Score: 5.60793
Sequence: ACACTACCTGTAGTGG
Position: -159
Score: 5.31875
Sequence: GCACTAGCTGTAGTGC
Locus tag: Pnap_3385
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Pnap_3386
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
nrdA-nrdB -190 5.6 ACACTACCTGTAGTGG Pnap_3385
-159 5.3 GCACTAGCTGTAGTGC
Polaromonas sp. JS666
Position: -215
Score: 5.47383
Sequence: ACACTACAGGTAGTGG
Position: -183
Score: 5.22765
Sequence: ACCCTAGGTATAGTGT
Locus tag: Bpro_1107
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Bpro_1106
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
nrdA-nrdB -215 5.5 ACACTACAGGTAGTGG Bpro_1107
-183 5.2 ACCCTAGGTATAGTGT
Rhodoferax ferrireducens DSM 15236
Position: -140
Score: 4.99376
Sequence: CCACTACCGGTAGTGG
Position: -109
Score: 5.25569
Sequence: CCCCTATATATAGTGT
Locus tag: Rfer_3347
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Rfer_3348
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
nrdA-nrdB -140 5 CCACTACCGGTAGTGG Rfer_3347
-109 5.3 CCCCTATATATAGTGT
Variovorax paradoxus S110
Position: -130
Score: 5.39649
Sequence: ACGCTACATCTAGTGG
Position: -98
Score: 5.65111
Sequence: ACCCTAGATATAGTGT
Locus tag: Vapar_0956
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Vapar_0955
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
nrdA-nrdB -130 5.4 ACGCTACATCTAGTGG Vapar_0956
-98 5.7 ACCCTAGATATAGTGT
Verminephrobacter eiseniae EF01-2
Position: -147
Score: 5.71552
Sequence: ACACTACAGGTAGTGT
Position: -115
Score: 5.53735
Sequence: ACACCATATATAGTGT
Locus tag: Veis_1496
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Veis_1495
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
nrdA-nrdB -147 5.7 ACACTACAGGTAGTGT Veis_1496
-115 5.5 ACACCATATATAGTGT
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