Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing nrdB gene

Properties
Regulog: NrdR - Pseudomonadaceae
Regulator type: Transcription factor
Regulator family: NrdR
Regulation mode: repressor
Biological process: Deoxyribonucleotide biosynthesis
Effector: Deoxyribonucleotides
Phylum: Proteobacteria/gamma
Built upon 35 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Azotobacter vinelandii AvOP
Position: -352
Score: 5.02149
Sequence: CCCCTACATATAGGGA
Position: -163
Score: 5.42064
Sequence: CCACTAGATGTTGTGG
Locus tag: Avin_33290
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: Avin_33300
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
nrdA-nrdB -352 5 CCCCTACATATAGGGA Avin_33290
-163 5.4 CCACTAGATGTTGTGG
Pseudomonas aeruginosa PAO1
Position: -398
Score: 4.8741
Sequence: CCCCTATATCTTGGGT
Position: -194
Score: 5.0483
Sequence: CCACTAGGTATTGTGT
Locus tag: PA1156
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: PA1155
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
nrdA-nrdB -398 4.9 CCCCTATATCTTGGGT PA1156
-194 5 CCACTAGGTATTGTGT
Pseudomonas entomophila L48
Position: -453
Score: 4.27906
Sequence: ACACCATATGCTGTGG
Position: -422
Score: 4.8414
Sequence: ACACAACATATAGGAT
Locus tag: PSEEN1335
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
nrdB -453 4.3 ACACCATATGCTGTGG PSEEN1335
-422 4.8 ACACAACATATAGGAT
Pseudomonas fluorescens Pf-5
Position: -434
Score: 4.06353
Sequence: ACACAACATCTAGTAA
Locus tag: PFL_4524
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
nrdB -434 4.1 ACACAACATCTAGTAA PFL_4524
Pseudomonas putida KT2440
Position: -375
Score: 3.82803
Sequence: ACACCATATGATGTGC
Position: -343
Score: 4.68858
Sequence: GCACAACATATAGGTT
Locus tag: PP1177
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
nrdB -375 3.8 ACACCATATGATGTGC PP1177
-343 4.7 GCACAACATATAGGTT
Pseudomonas stutzeri A1501
Position: -392
Score: 5.12427
Sequence: CCCCTAGATGTTGGGT
Position: -202
Score: 5.21223
Sequence: ACACAACATATTGTGT
Locus tag: PST_1637
Name: nrdA
Funciton: Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1)
Locus tag: PST_1636
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
nrdA-nrdB -392 5.1 CCCCTAGATGTTGGGT PST_1637
-202 5.2 ACACAACATATTGTGT
Pseudomonas syringae pv. tomato str. DC3000
Position: -447
Score: 4.38541
Sequence: TCACTATATGCTGCGC
Position: -415
Score: 3.93729
Sequence: ACACTACATAAGGGAT
Locus tag: PSPTO1661
Name: nrdB
Funciton: Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1)
nrdB -447 4.4 TCACTATATGCTGCGC PSPTO1661
-415 3.9 ACACTACATAAGGGAT
© 2009-2020 RegPrecise