Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing topA gene

Properties
Regulog: NrdR - Pseudomonadaceae
Regulator type: Transcription factor
Regulator family: NrdR
Regulation mode: repressor
Biological process: Deoxyribonucleotide biosynthesis
Effector: Deoxyribonucleotides
Phylum: Proteobacteria/gamma
Built upon 35 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Azotobacter vinelandii AvOP
Position: -222
Score: 5.39327
Sequence: CCACTATATATAGCGC
Locus tag: Avin_14470
Name: topA
Funciton: DNA topoisomerase I (EC 5.99.1.2)
topA -222 5.4 CCACTATATATAGCGC Avin_14470
Pseudomonas aeruginosa PAO1
Position: -76
Score: 5.68694
Sequence: CCACTATATATAGCGG
Locus tag: PA3011
Name: topA
Funciton: DNA topoisomerase I (EC 5.99.1.2)
topA -76 5.7 CCACTATATATAGCGG PA3011
Pseudomonas entomophila L48
Position: -73
Score: 5.68694
Sequence: CCACTATATATAGCGG
Locus tag: PSEEN3725
Name: topA
Funciton: DNA topoisomerase I (EC 5.99.1.2)
topA -73 5.7 CCACTATATATAGCGG PSEEN3725
Pseudomonas fluorescens Pf-5
Position: -72
Score: 5.68694
Sequence: CCACTATATATAGCGG
Locus tag: PFL_1942
Name: topA
Funciton: DNA topoisomerase I (EC 5.99.1.2)
topA -72 5.7 CCACTATATATAGCGG PFL_1942
Pseudomonas mendocina ymp
Position: -69
Score: 5.68694
Sequence: CCACTATATATAGCGG
Locus tag: Pmen_1583
Name: topA
Funciton: DNA topoisomerase I (EC 5.99.1.2)
topA -69 5.7 CCACTATATATAGCGG Pmen_1583
Pseudomonas putida KT2440
Position: -73
Score: 5.68694
Sequence: CCACTATATATAGCGG
Locus tag: PP2139
Name: topA
Funciton: DNA topoisomerase I (EC 5.99.1.2)
topA -73 5.7 CCACTATATATAGCGG PP2139
Pseudomonas stutzeri A1501
Position: -241
Score: 5.68694
Sequence: CCACTATATATAGCGG
Locus tag: PST_1729
Name: topA
Funciton: DNA topoisomerase I (EC 5.99.1.2)
topA -241 5.7 CCACTATATATAGCGG PST_1729
Pseudomonas syringae pv. tomato str. DC3000
Position: -71
Score: 5.68694
Sequence: CCACTATATATAGCGT
Locus tag: PSPTO3514
Name: topA
Funciton: DNA topoisomerase I (EC 5.99.1.2)
topA -71 5.7 CCACTATATATAGCGT PSPTO3514
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