Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing COG1040 gene

Properties
Regulog: BirA - Pseudomonadaceae
Regulator type: Transcription factor
Regulator family: BirA
Regulation mode: repressor
Biological process: Biotin biosynthesis
Effector: Biotin
Phylum: Proteobacteria/Gamma
Built upon 15 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Azotobacter vinelandii AvOP
Position: -16
Score: 8.99046
Sequence: CTGTCAACC-(15)-GGTTTACAA
Locus tag: Avin_05970
Name: COG1040
Funciton: Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy
COG1040 -16 9 CTGTCAACC-(15)-GGTTTACAA Avin_05970
Pseudomonas entomophila L48
Position: 5
Score: 8.10836
Sequence: CTGTCAACC-(15)-GGCTTACAA
Locus tag: PSEEN5122
Name: COG1040
Funciton: Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy
COG1040 5 8.1 CTGTCAACC-(15)-GGCTTACAA PSEEN5122
Pseudomonas fluorescens Pf-5
Position: 5
Score: 8.81229
Sequence: CTGTCAACC-(15)-GGTTTACAT
Locus tag: PFL_5694
Name: COG1040
Funciton: Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy
COG1040 5 8.8 CTGTCAACC-(15)-GGTTTACAT PFL_5694
Pseudomonas mendocina ymp
Position: -107
Score: 8.23801
Sequence: CTGTCAACC-(14)-GGTTGACGA
Locus tag: Pmen_4089
Name: null
Funciton: Permeases of the major facilitator superfamily
Locus tag: Pmen_4090
Name: COG1040
Funciton: Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy
Pmen_4089-COG1040 -107 8.2 CTGTCAACC-(14)-GGTTGACGA Pmen_4089
Pseudomonas putida KT2440
Position: 5
Score: 8.5622
Sequence: CTGTCAACT-(15)-GGTTTACAA
Locus tag: PP0361
Name: COG1040
Funciton: Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy
COG1040 5 8.6 CTGTCAACT-(15)-GGTTTACAA PP0361
Pseudomonas stutzeri A1501
Position: -21
Score: 8.99046
Sequence: CTGTCAACC-(14)-GGTTTACAA
Locus tag: PST_3867
Name: COG1040
Funciton: Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy
COG1040 -21 9 CTGTCAACC-(14)-GGTTTACAA PST_3867
Pseudomonas syringae pv. tomato str. DC3000
Position: 5
Score: 8.81229
Sequence: CTGTCAACC-(15)-GGTTTACAT
Locus tag: PSPTO0493
Name: COG1040
Funciton: Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy
COG1040 5 8.8 CTGTCAACC-(15)-GGTTTACAT PSPTO0493
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