Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing bioD gene

Properties
Regulog: BirA - Alteromonadales
Regulator type: Transcription factor
Regulator family: BirA
Regulation mode: repressor
Biological process: Biotin biosynthesis
Effector: Biotin
Phylum: Proteobacteria/gamma
Built upon 17 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Alteromonadales bacterium TW-7
Position: -95
Score: 8.02193
Sequence: ATGTAAACT-(16)-CGTTGACAA
Locus tag: ATW7_13073
Name: bioB
Funciton: Biotin synthase (EC 2.8.1.6)
Locus tag: ATW7_13068
Name: bioF
Funciton: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)
Locus tag: ATW7_13063
Name: bioC
Funciton: Biotin biosynthesis protein BioC
Locus tag: ATW7_13058
Name: bioD
Funciton: Dethiobiotin synthetase (EC 6.3.3.3)
bioB-bioF-bioC-bioD -95 8 ATGTAAACT-(16)-CGTTGACAA ATW7_13073
Alteromonas macleodii 'Deep ecotype'
Position: -86
Score: 6.89628
Sequence: TgGTAAAgg-(15)-aGTTgACAA
Locus tag: MADE_02211
Name: bioB
Funciton: Biotin synthase (EC 2.8.1.6)
Locus tag: MADE_02210
Name: bioF
Funciton: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)
Locus tag: MADE_02209
Name: bioC
Funciton: Biotin biosynthesis protein BioC
Locus tag: MADE_02208
Name: bioD
Funciton: Dethiobiotin synthetase (EC 6.3.3.3)
bioB-bioF-bioC-bioD -86 6.9 TgGTAAAgg-(15)-aGTTgACAA MADE_02211
Colwellia psychrerythraea 34H
Position: -87
Score: 7.67587
Sequence: TTGTTAACC-(15)-CGTTGACAT
Locus tag: CPS_2594
Name: bioB
Funciton: Biotin synthase (EC 2.8.1.6)
Locus tag: CPS_2595
Name: bioF
Funciton: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)
Locus tag: CPS_2596
Name: bioC
Funciton: Biotin biosynthesis protein BioC
Locus tag: CPS_2597
Name: bioD
Funciton: Dethiobiotin synthetase (EC 6.3.3.3)
bioB-bioF-bioC-bioD -87 7.7 TTGTTAACC-(15)-CGTTGACAT CPS_2594
Glaciecola sp. HTCC2999
Position: -92
Score: 8.70579
Sequence: TTGTAAACT-(15)-GGTTGACAA
Locus tag: GHTCC_010100004698
Name: bioB
Funciton: Biotin synthase (EC 2.8.1.6)
Locus tag: GHTCC_010100004693
Name: bioF
Funciton: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)
Locus tag: GHTCC_010100004688
Name: bioC
Funciton: Biotin biosynthesis protein BioC
Locus tag: GHTCC_010100004683
Name: bioD
Funciton: Dethiobiotin synthetase (EC 6.3.3.3)
bioB-bioF-bioC-bioD -92 8.7 TTGTAAACT-(15)-GGTTGACAA GHTCC_010100004698
Idiomarina baltica OS145
Position: -95
Score: 6.809
Sequence: TTGTAAAGT-(15)-AATTGACAG
Locus tag: OS145_05992
Name: bioB
Funciton: Biotin synthase (EC 2.8.1.6)
Locus tag: OS145_05997
Name: bioF
Funciton: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)
Locus tag: OS145_06002
Name: bioC
Funciton: Biotin biosynthesis protein BioC
Locus tag: OS145_06007
Name: bioD
Funciton: Dethiobiotin synthetase (EC 6.3.3.3)
bioB-bioF-bioC-bioD -95 6.8 TTGTAAAGT-(15)-AATTGACAG OS145_05992
Idiomarina loihiensis L2TR
Position: -89
Score: 6.61898
Sequence: TTGTAAAgt-(15)-taTTgACAg
Locus tag: IL1324
Name: bioB
Funciton: Biotin synthase (EC 2.8.1.6)
Locus tag: IL1323
Name: bioF
Funciton: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)
Locus tag: IL1322
Name: bioC
Funciton: Biotin biosynthesis protein BioC
Locus tag: IL1321
Name: bioD
Funciton: Dethiobiotin synthetase (EC 6.3.3.3)
bioB-bioF-bioC-bioD -89 6.6 TTGTAAAgt-(15)-taTTgACAg IL1324
Pseudoalteromonas atlantica T6c
Position: -87
Score: 7.61506
Sequence: TTGTAAAGT-(15)-AGTTGACAA
Locus tag: Patl_2557
Name: bioB
Funciton: Biotin synthase (EC 2.8.1.6)
Locus tag: Patl_2556
Name: bioF
Funciton: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)
Locus tag: Patl_2555
Name: bioC
Funciton: Biotin biosynthesis protein BioC
Locus tag: Patl_2554
Name: bioD
Funciton: Dethiobiotin synthetase (EC 6.3.3.3)
bioB-bioF-bioC-bioD -87 7.6 TTGTAAAGT-(15)-AGTTGACAA Patl_2557
Pseudoalteromonas tunicata D2
Position: -95
Score: 7.90934
Sequence: ATGTAAACT-(16)-TGTTGACAA
Locus tag: PTD2_19567
Name: bioB
Funciton: Biotin synthase (EC 2.8.1.6)
Locus tag: PTD2_19572
Name: bioF
Funciton: 8-amino-7-oxononanoate synthase (EC 2.3.1.47)
Locus tag: PTD2_19577
Name: bioC
Funciton: Biotin biosynthesis protein BioC
Locus tag: PTD2_19582
Name: bioD
Funciton: Dethiobiotin synthetase (EC 6.3.3.3)
bioB-bioF-bioC-bioD -95 7.9 ATGTAAACT-(16)-TGTTGACAA PTD2_19567
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