Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing rpoS gene

Properties
Regulog: PsrA - Pseudomonadaceae
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Fatty acid degradation
Effector: Oleate
Phylum: Proteobacteria/gamma
Built upon 69 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Azotobacter vinelandii AvOP
Position: -422
Score: 4.77927
Sequence: CCTCAAACGGCAGTTTGAAT
Locus tag: Avin_38680
Name: rpoS
Funciton: RNA polymerase sigma factor RpoS
rpoS -422 4.8 CCTCAAACGGCAGTTTGAAT Avin_38680
Pseudomonas aeruginosa PAO1
Position: -427
Score: 4.76789
Sequence: CCTCAAACGGAAGTTTGAAT
Locus tag: PA3622
Name: rpoS
Funciton: RNA polymerase sigma factor RpoS
rpoS -427 4.8 CCTCAAACGGAAGTTTGAAT PA3622
Pseudomonas entomophila L48
Position: -428
Score: 5.10652
Sequence: CTTCAAACGGTAGTTTGAAT
Locus tag: PSEEN4189
Name: rpoS
Funciton: RNA polymerase sigma factor RpoS
rpoS -428 5.1 CTTCAAACGGTAGTTTGAAT PSEEN4189
Pseudomonas fluorescens Pf-5
Position: -429
Score: 5.10652
Sequence: CTTCAAACGGTAGTTTGAAT
Locus tag: PFL_1207
Name: rpoS
Funciton: RNA polymerase sigma factor RpoS
rpoS -429 5.1 CTTCAAACGGTAGTTTGAAT PFL_1207
Pseudomonas mendocina ymp
Position: -424
Score: 4.78992
Sequence: CCTCAAACGGTAGTTTGAAT
Locus tag: Pmen_3020
Name: rpoS
Funciton: RNA polymerase sigma factor RpoS
rpoS -424 4.8 CCTCAAACGGTAGTTTGAAT Pmen_3020
Pseudomonas putida KT2440
Position: -431
Score: 5.10652
Sequence: CTTCAAACGGTAGTTTGAAT
Locus tag: PP1623
Name: rpoS
Funciton: RNA polymerase sigma factor RpoS
rpoS -431 5.1 CTTCAAACGGTAGTTTGAAT PP1623
Pseudomonas stutzeri A1501
Position: -421
Score: 4.78992
Sequence: CCTCAAACGGTAGTTTGAAT
Locus tag: PST_1572
Name: rpoS
Funciton: RNA polymerase sigma factor RpoS
rpoS -421 4.8 CCTCAAACGGTAGTTTGAAT PST_1572
Pseudomonas syringae pv. tomato str. DC3000
Position: -427
Score: 4.77927
Sequence: CCTCAAACGGCAGTTTGAAT
Locus tag: PSPTO1565
Name: rpoS
Funciton: RNA polymerase sigma factor RpoS
rpoS -427 4.8 CCTCAAACGGCAGTTTGAAT PSPTO1565
© 2009-2020 RegPrecise