Orthologous regulated operons containing xylF gene

Properties
Regulog:	XylR - Rhizobiales
Regulator type:	Transcription factor
Regulator family:	ROK
Regulation mode:	repressor
Biological process:	Xylose utilization
Effector:	Xylose
Phylum:	Proteobacteria/alpha

Built upon 19 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Agrobacterium tumefaciens str. C58 (Cereon)
Position: -107 Score: 5.3599 Sequence: ATTTTCTCGACTGTCGAGAAAAT Locus tag: Atu3576 Name: xylF Funciton: Xylose ABC transporter, periplasmic xylose-binding protein XylF Locus tag: Atu3575 Name: xylH Funciton: Xylose ABC transporter, permease protein XylH Locus tag: Atu3574 Name: xylG Funciton: Xylose ABC transporter, ATP-binding protein XylG
xylF-xylH-xylG	-107	5.4	ATTTTCTCGACTGTCGAGAAAAT	Atu3576
Mesorhizobium loti MAFF303099
Position: -171 Score: 5.99235 Sequence: TTTATTCCGAGGCTCGAAAAAAA Position: -87 Score: 5.63487 Sequence: GTTTTTTCGAGGCTCGAAAAAAT Locus tag: mll3713 Name: xylF Funciton: Xylose ABC transporter, periplasmic xylose-binding protein XylF Locus tag: mll3711 Name: xylH Funciton: Xylose ABC transporter, permease protein XylH Locus tag: mll3710 Name: xylG Funciton: Xylose ABC transporter, ATP-binding protein XylG
xylF-xylH-xylG	-171	6	TTTATTCCGAGGCTCGAAAAAAA	mll3713
	-87	5.6	GTTTTTTCGAGGCTCGAAAAAAT
Mesorhizobium sp. BNC1
Position: -217 Score: 5.81495 Sequence: CTTTTTTCGAGGCTCGAAAAAAT Locus tag: Meso_3114 Name: xylF Funciton: Xylose ABC transporter, periplasmic xylose-binding protein XylF Locus tag: Meso_3113 Name: xylH Funciton: Xylose ABC transporter, permease protein XylH Locus tag: Meso_3112 Name: xylG Funciton: Xylose ABC transporter, ATP-binding protein XylG
xylF-xylH-xylG	-217	5.8	CTTTTTTCGAGGCTCGAAAAAAT	Meso_3114
Rhizobium etli CFN 42
Position: -104 Score: 4.94179 Sequence: AATTTCTCGACTGTCGAGAAAAT Locus tag: RHE_CH03172 Name: xylF Funciton: Xylose ABC transporter, periplasmic xylose-binding protein XylF Locus tag: RHE_CH03173 Name: xylH Funciton: Xylose ABC transporter, permease protein XylH Locus tag: RHE_CH03174 Name: xylG Funciton: Xylose ABC transporter, ATP-binding protein XylG
xylF-xylH-xylG	-104	4.9	AATTTCTCGACTGTCGAGAAAAT	RHE_CH03172
Rhizobium leguminosarum bv. viciae 3841
Position: -106 Score: 5.05894 Sequence: AATTTCTCGACTGTCGAGAAAAA Locus tag: RL3624 Name: xylF Funciton: Xylose ABC transporter, periplasmic xylose-binding protein XylF Locus tag: RL3625 Name: xylH Funciton: Xylose ABC transporter, permease protein XylH Locus tag: RL3626 Name: xylG Funciton: Xylose ABC transporter, ATP-binding protein XylG
xylF-xylH-xylG	-106	5.1	AATTTCTCGACTGTCGAGAAAAA	RL3624
Rhizobium sp. NGR234
Position: -126 Score: 5.47706 Sequence: ATTTTCTCGACTGTCGAGAAAAA Locus tag: NGR_c24220 Name: xylF Funciton: Xylose ABC transporter, periplasmic xylose-binding protein XylF
xylF	-126	5.5	ATTTTCTCGACTGTCGAGAAAAA	NGR_c24220
Sinorhizobium meliloti 1021
Position: -115 Score: 5.47706 Sequence: ATTTTCTCGACTGTCGAGAAAAA Locus tag: SMb20902 Name: xylF Funciton: Xylose ABC transporter, periplasmic xylose-binding protein XylF Locus tag: SMb20903 Name: xylH Funciton: Xylose ABC transporter, permease protein XylH Locus tag: SMb20904 Name: xylG Funciton: Xylose ABC transporter, ATP-binding protein XylG
xylF-xylH-xylG	-115	5.5	ATTTTCTCGACTGTCGAGAAAAA	SMb20902

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Orthologous regulated operons containing xylF gene

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --