Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing PF04055 gene

Properties
Regulog: LexA - Rhodobacterales
Regulator type: Transcription factor
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Phylum: Proteobacteria
Built upon 128 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Hyphomonas neptunium ATCC 15444
Position: -100
Score: 5.27482
Sequence: GTTCTTGCTTTGTTC
Locus tag: HNE_1903
Name: PF04055
Funciton: Radical SAM domain protein
PF04055 -100 5.3 GTTCTTGCTTTGTTC HNE_1903
Jannaschia sp. CCS1
Position: -9
Score: 4.72747
Sequence: GTTCTTCAAATGTTC
Locus tag: Jann_2549
Name: PF04055
Funciton: Radical SAM domain protein
PF04055 -9 4.7 GTTCTTCAAATGTTC Jann_2549
Oceanicaulis alexandrii HTCC2633
Position: -9
Score: 5.11134
Sequence: GTTCTTGATATGTTC
Locus tag: OA2633_14191
Name: PF04055
Funciton: Radical SAM domain protein
PF04055 -9 5.1 GTTCTTGATATGTTC OA2633_14191
Oceanicola batsensis HTCC2597
Position: -27
Score: 5.02592
Sequence: GTTCTCTTAATGTTC
Locus tag: OB2597_03227
Name: PF04055
Funciton: Radical SAM domain protein
PF04055 -27 5 GTTCTCTTAATGTTC OB2597_03227
Oceanicola granulosus HTCC2516
Position: -30
Score: 5.4342
Sequence: GTTCTTCTTTTGTTC
Locus tag: OG2516_06172
Name: PF04055
Funciton: Radical SAM domain protein
PF04055 -30 5.4 GTTCTTCTTTTGTTC OG2516_06172
Paracoccus denitrificans PD1222
Position: -27
Score: 4.79829
Sequence: GTTCTCTAAATGTTC
Locus tag: Pden_3951
Name: PF04055
Funciton: Radical SAM domain protein
PF04055 -27 4.8 GTTCTCTAAATGTTC Pden_3951
Rhodobacter sphaeroides 2.4.1
Position: -27
Score: 4.85169
Sequence: GTTCCCTTTGCGTTC
Locus tag: RSP_2123
Name: PF04055
Funciton: Radical SAM domain protein
PF04055 -27 4.9 GTTCCCTTTGCGTTC RSP_2123
Rhodobacterales bacterium HTCC2654
Position: -20
Score: 4.54277
Sequence: GTTCTACTAATGTTC
Locus tag: RB2654_02045
Name: PF04055
Funciton: Radical SAM domain protein
PF04055 -20 4.5 GTTCTACTAATGTTC RB2654_02045
Roseobacter sp. MED193
Position: -39
Score: 5.20657
Sequence: GTTCTTCATTTGTTC
Locus tag: MED193_22781
Name: PF04055
Funciton: Radical SAM domain protein
PF04055 -39 5.2 GTTCTTCATTTGTTC MED193_22781
Roseovarius nubinhibens ISM
Position: -27
Score: 5.13342
Sequence: GTTCGCGGTTTGTTC
Locus tag: ISM_13455
Name: PF04055
Funciton: Radical SAM domain protein
PF04055 -27 5.1 GTTCGCGGTTTGTTC ISM_13455
Roseovarius sp. 217
Position: 6
Score: 5.13155
Sequence: GTTCTCTATATGTTC
Locus tag: ROS217_19572
Name: PF04055
Funciton: Radical SAM domain protein
PF04055 6 5.1 GTTCTCTATATGTTC ROS217_19572
Silicibacter TM1040
Position: -39
Score: 5.15315
Sequence: GTTCTTTATTTGTTC
Locus tag: TM1040_1469
Name: PF04055
Funciton: Radical SAM domain protein
PF04055 -39 5.2 GTTCTTTATTTGTTC TM1040_1469
Sulfitobacter sp. EE-36
Position: -27
Score: 5.02701
Sequence: GTTCCTAATTTGTTC
Locus tag: EE36_15677
Name: PF04055
Funciton: Radical SAM domain protein
PF04055 -27 5 GTTCCTAATTTGTTC EE36_15677
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