Orthologous regulated operons containing ruvA gene
| Regulog: | LexA - Rhodobacterales |
| Regulator type: | Transcription factor |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Phylum: | Proteobacteria |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Jannaschia sp. CCS1 | ||||
|
Position: 2
Score: 5.19684 Sequence: GTTCGCGTTTCGTGC
Locus tag: Jann_0964
Name: ruvC Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: Jann_0965
Name: ruvA Funciton: Holliday junction DNA helicase RuvA
Locus tag: Jann_0966
Name: ruvB Funciton: Holliday junction DNA helicase RuvB |
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| ruvC-ruvA-ruvB | 2 | 5.2 | GTTCGCGTTTCGTGC | Jann_0964 |
| Loktanella vestfoldensis SKA53 | ||||
|
Position: -49
Score: 5.30572 Sequence: GTTCGCCTTTTGTGC
Locus tag: SKA53_08611
Name: ruvC Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: SKA53_08606
Name: ruvA Funciton: Holliday junction DNA helicase RuvA
Locus tag: SKA53_08601
Name: ruvB Funciton: Holliday junction DNA helicase RuvB |
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| ruvC-ruvA-ruvB | -49 | 5.3 | GTTCGCCTTTTGTGC | SKA53_08611 |
| Oceanicaulis alexandrii HTCC2633 | ||||
|
Position: -38
Score: 4.9189 Sequence: GGTCGCGTTTTGTTC
Locus tag: OA2633_07399
Name: ruvC Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: OA2633_07394
Name: ruvA Funciton: Holliday junction DNA helicase RuvA
Locus tag: OA2633_07389
Name: ruvB Funciton: Holliday junction DNA helicase RuvB |
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| ruvC-ruvA-ruvB | -38 | 4.9 | GGTCGCGTTTTGTTC | OA2633_07399 |
| Oceanicola batsensis HTCC2597 | ||||
|
Position: -61
Score: 4.72409 Sequence: GTTCACTATTCGTGC
Locus tag: OB2597_15620
Name: ruvC Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: OB2597_15625
Name: ruvA Funciton: Holliday junction DNA helicase RuvA
Locus tag: OB2597_15630
Name: ruvB Funciton: Holliday junction DNA helicase RuvB |
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| ruvC-ruvA-ruvB | -61 | 4.7 | GTTCACTATTCGTGC | OB2597_15620 |
| Oceanicola granulosus HTCC2516 | ||||
|
Position: -50
Score: 4.85623 Sequence: GTTCGCTGTTTGTGC
Locus tag: OG2516_07702
Name: ruvC Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: OG2516_07697
Name: ruvA Funciton: Holliday junction DNA helicase RuvA
Locus tag: OG2516_07692
Name: ruvB Funciton: Holliday junction DNA helicase RuvB |
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| ruvC-ruvA-ruvB | -50 | 4.9 | GTTCGCTGTTTGTGC | OG2516_07702 |
| Paracoccus denitrificans PD1222 | ||||
|
Position: -44
Score: 5.14624 Sequence: GTTCGCCTTTCGTGC
Locus tag: Pden_0696
Name: ruvC Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: Pden_0695
Name: ruvA Funciton: Holliday junction DNA helicase RuvA
Locus tag: Pden_0694
Name: htpx Funciton: Zn-dependent protease with chaperone function
Locus tag: Pden_0693
Name: ruvB Funciton: Holliday junction DNA helicase RuvB |
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| ruvC-ruvA-htpx-ruvB | -44 | 5.1 | GTTCGCCTTTCGTGC | Pden_0696 |
| Rhodobacter sphaeroides 2.4.1 | ||||
|
Position: -48
Score: 4.97404 Sequence: GTTCCCGCTTCGTGC
Locus tag: RSP_0556
Name: ruvC Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: RSP_0555
Name: ruvA Funciton: Holliday junction DNA helicase RuvA
Locus tag: RSP_0554
Name: htpx Funciton: Zn-dependent protease with chaperone function
Locus tag: RSP_0553
Name: ruvB Funciton: Holliday junction DNA helicase RuvB |
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| ruvC-ruvA-htpx-ruvB | -48 | 5 | GTTCCCGCTTCGTGC | RSP_0556 |
| Rhodobacterales bacterium HTCC2654 | ||||
|
Position: -62
Score: 5.19684 Sequence: GTTCGCGTTTCGTGC
Locus tag: RB2654_05712
Name: ruvC Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: RB2654_05707
Name: ruvA Funciton: Holliday junction DNA helicase RuvA
Locus tag: RB2654_05702
Name: ruvB Funciton: Holliday junction DNA helicase RuvB |
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| ruvC-ruvA-ruvB | -62 | 5.2 | GTTCGCGTTTCGTGC | RB2654_05712 |
| Roseobacter sp. MED193 | ||||
|
Position: -64
Score: 5.30572 Sequence: GTTCGCCTTTTGTGC
Locus tag: MED193_09210
Name: ruvC Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: MED193_09205
Name: ruvA Funciton: Holliday junction DNA helicase RuvA
Locus tag: MED193_09200
Name: ruvA Funciton: Holliday junction DNA helicase RuvA
Locus tag: MED193_09195
Name: ruvB Funciton: Holliday junction DNA helicase RuvB |
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| ruvC-ruvA-ruvA-ruvB | -64 | 5.3 | GTTCGCCTTTTGTGC | MED193_09210 |
| Roseovarius nubinhibens ISM | ||||
|
Position: -60
Score: 5.15214 Sequence: GTTCTTGTTTCGTGC
Locus tag: ISM_03450
Name: ruvC Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: ISM_03445
Name: ruvA Funciton: Holliday junction DNA helicase RuvA
Locus tag: ISM_03440
Name: ruvB Funciton: Holliday junction DNA helicase RuvB |
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| ruvC-ruvA-ruvB | -60 | 5.2 | GTTCTTGTTTCGTGC | ISM_03450 |
| Roseovarius sp. 217 | ||||
|
Position: -51
Score: 5.18402 Sequence: GTTCCCGTTTCGTGC
Locus tag: ROS217_22507
Name: ruvC Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: ROS217_22502
Name: ruvA Funciton: Holliday junction DNA helicase RuvA
Locus tag: ROS217_22497
Name: ruvB Funciton: Holliday junction DNA helicase RuvB |
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| ruvC-ruvA-ruvB | -51 | 5.2 | GTTCCCGTTTCGTGC | ROS217_22507 |
| Silicibacter TM1040 | ||||
|
Position: 4
Score: 5.35632 Sequence: GTTCGCGTTTTGTGC
Locus tag: TM1040_2373
Name: ruvC Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: TM1040_2372
Name: ruvA Funciton: Holliday junction DNA helicase RuvA
Locus tag: TM1040_2371
Name: ruvB Funciton: Holliday junction DNA helicase RuvB |
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| ruvC-ruvA-ruvB | 4 | 5.4 | GTTCGCGTTTTGTGC | TM1040_2373 |
| Silicibacter pomeroyi DSS-3 | ||||
|
Position: -60
Score: 5.13342 Sequence: GTTCCCCTTTCGTGC
Locus tag: SPO3117
Name: ruvC Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: SPO3116
Name: ruvA Funciton: Holliday junction DNA helicase RuvA
Locus tag: SPO3115
Name: ruvB Funciton: Holliday junction DNA helicase RuvB |
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| ruvC-ruvA-ruvB | -60 | 5.1 | GTTCCCCTTTCGTGC | SPO3117 |
| Sulfitobacter sp. EE-36 | ||||
|
Position: -56
Score: 5.19684 Sequence: GTTCGCGTTTCGTGC
Locus tag: EE36_09705
Name: ruvC Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: EE36_09710
Name: ruvA Funciton: Holliday junction DNA helicase RuvA
Locus tag: EE36_09715
Name: ruvB Funciton: Holliday junction DNA helicase RuvB |
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| ruvC-ruvA-ruvB | -56 | 5.2 | GTTCGCGTTTCGTGC | EE36_09705 |