Orthologous regulated operons containing csgA gene

Properties
Regulog:	LiuR - Rhodospirillales
Regulator type:	Transcription factor
Regulator family:	MerR
Regulation mode:	repressor
Biological process:	Branched-chain amino acid degradation
Effector:
Phylum:	Proteobacteria/alpha

Built upon 17 sites [see more]

Orthologous operons
Operon	Position	Score	Sequence	Locus Tag of the First Gene
Rhodospirillum rubrum ATCC 11170
Position: -194 Score: 5.79697 Sequence: TTTGACGTTTACGTAAAC Position: -188 Score: 4.95051 Sequence: GTTTACGTAAACGGAAGA Locus tag: Rru_A1948 Name: liuA Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Butyryl-CoA dehydrogenase (EC 1.3.99.2) Locus tag: Rru_A1947 Name: null Funciton: nucleotidyltransferase-like Locus tag: Rru_A1946 Name: ivdA Funciton: Acetyl-CoA C-acyltransferase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) Locus tag: Rru_A1945 Name: csgA Funciton: Short-chain dehydrogenase/reductase SDR( EC:1.1.1.184 ) Locus tag: Rru_A1944 Name: Rru_A1944 Funciton: 2-hydroxychromene-2-carboxylate isomerase (EC 5.3.99.-) Locus tag: Rru_A1943 Name: liuD Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) Locus tag: Rru_A1942 Name: liuC Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) Locus tag: Rru_A1941 Name: liuB Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) Locus tag: Rru_A1940 Name: liuE Funciton: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
liuA-Rru_A1947-ivdA-csgA-Rru_A1944-liuD-liuC-liuB-liuE	-194	5.8	TTTGACGTTTACGTAAAC	Rru_A1948
	-188	5	GTTTACGTAAACGGAAGA

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --