Orthologous regulated operons containing acdA gene
| Regulog: | LiuR - Rhodobacterales |
| Regulator type: | Transcription factor |
| Regulator family: | MerR |
| Regulation mode: | repressor |
| Biological process: | Branched-chain amino acid degradation |
| Effector: | |
| Phylum: | Proteobacteria/alpha |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Hyphomonas neptunium ATCC 15444 | ||||
|
Position: -56
Score: 5.76004 Sequence: GCTTACGTGAACGTAAGC
Position: -50
Score: 4.57942 Sequence: GTGAACGTAAGCGGCAAC
Locus tag: HNE_0669
Name: acdL Funciton: acyl-CoA dehydrogenase
Locus tag: HNE_0670
Name: null Funciton: hypothetical protein
Locus tag: HNE_0671
Name: acdA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Locus tag: HNE_0672
Name: acdB Funciton: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) |
||||
| acdL-HNE_0670-acdA-acdB | -56 | 5.8 | GCTTACGTGAACGTAAGC | HNE_0669 |
| -50 | 4.6 | GTGAACGTAAGCGGCAAC | ||
| Jannaschia sp. CCS1 | ||||
|
Position: -93
Score: 5.17628 Sequence: AATTACGTAAACGTCATC
Locus tag: Jann_2969
Name: liuR Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Locus tag: Jann_2970
Name: acdH Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
Locus tag: Jann_2971
Name: null Funciton: hypothetical protein
Locus tag: Jann_2972
Name: null Funciton: hypothetical protein
Locus tag: Jann_2973
Name: PF04828 Funciton: Glutathione S-transferase, unnamed subgroup (EC 2.5.1.18)
Locus tag: Jann_2974
Name: null Funciton: hypothetical protein
Locus tag: Jann_2975
Name: acdA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Locus tag: Jann_2976
Name: null Funciton: hypothetical protein
Locus tag: Jann_2977
Name: acdB Funciton: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) |
||||
| liuR-acdH-Jann_2971-Jann_2972-PF04828-Jann_2974-acdA-Jann_2976-acdB | -93 | 5.2 | AATTACGTAAACGTCATC | Jann_2969 |
| Loktanella vestfoldensis SKA53 | ||||
|
Position: -84
Score: 6.02906 Sequence: GTTTACGTAAACGTCACC
Locus tag: SKA53_09319
Name: liuR Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Locus tag: SKA53_09324
Name: acdH Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
Locus tag: SKA53_09329
Name: PF04828 Funciton: Glutathione S-transferase, unnamed subgroup (EC 2.5.1.18)
Locus tag: SKA53_09334
Name: acdA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Locus tag: SKA53_09339
Name: acdB Funciton: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) |
||||
| liuR-acdH-PF04828-acdA-acdB | -84 | 6 | GTTTACGTAAACGTCACC | SKA53_09319 |
| Oceanicaulis alexandrii HTCC2633 | ||||
|
Position: -36
Score: 5.90252 Sequence: GTTGACGTTCACGTCAAG
Locus tag: OA2633_06094
Name: liuR Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Locus tag: OA2633_06089
Name: acdH Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
Locus tag: OA2633_06084
Name: acdL Funciton: acyl-CoA dehydrogenase
Locus tag: OA2633_06079
Name: null Funciton: hypothetical protein
Locus tag: OA2633_06074
Name: acdA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Locus tag: OA2633_06069
Name: null Funciton: hypothetical protein
Locus tag: OA2633_06064
Name: null Funciton: hypothetical protein
Locus tag: OA2633_06059
Name: acdB Funciton: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) |
||||
| liuR-acdH-acdL-OA2633_06079-acdA-OA2633_06069-OA2633_06064-acdB | -36 | 5.9 | GTTGACGTTCACGTCAAG | OA2633_06094 |
| Oceanicola batsensis HTCC2597 | ||||
|
Position: -84
Score: 5.29954 Sequence: GCTTACGCTTGCGTCAAC
Locus tag: OB2597_06240
Name: liuR Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Locus tag: OB2597_06245
Name: acdH Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
Locus tag: OB2597_06250
Name: null Funciton: hypothetical protein
Locus tag: OB2597_06255
Name: PF04828 Funciton: Glutathione S-transferase, unnamed subgroup (EC 2.5.1.18)
Locus tag: OB2597_06260
Name: acdA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Locus tag: OB2597_06265
Name: acdB Funciton: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) |
||||
| liuR-acdH-OB2597_06250-PF04828-acdA-acdB | -84 | 5.3 | GCTTACGCTTGCGTCAAC | OB2597_06240 |
| Paracoccus denitrificans PD1222 | ||||
|
Position: 5
Score: 5.2718 Sequence: CCTTACGCGAACGTCAAC
Locus tag: Pden_2867
Name: liuR Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Locus tag: Pden_2868
Name: acdH Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
Locus tag: Pden_2869
Name: PF04828 Funciton: Glutathione S-transferase, unnamed subgroup (EC 2.5.1.18)
Locus tag: Pden_2870
Name: acdA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Locus tag: Pden_2871
Name: acdB Funciton: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) |
||||
| liuR-acdH-PF04828-acdA-acdB | 5 | 5.3 | CCTTACGCGAACGTCAAC | Pden_2867 |
| Rhodobacter sphaeroides 2.4.1 | ||||
|
Position: -87
Score: 6.27315 Sequence: GTTTACGTCAACGTCAAG
Locus tag: RSP_2200
Name: liuR Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Locus tag: RSP_2199
Name: acdH Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
Locus tag: RSP_2198
Name: PF04828 Funciton: Glutathione S-transferase, unnamed subgroup (EC 2.5.1.18)
Locus tag: RSP_2197
Name: acdA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Locus tag: RSP_2196
Name: acdB Funciton: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) |
||||
| liuR-acdH-PF04828-acdA-acdB | -87 | 6.3 | GTTTACGTCAACGTCAAG | RSP_2200 |
| Rhodobacterales bacterium HTCC2654 | ||||
|
Position: -69
Score: 5.72564 Sequence: GTTGACGTAAACGTAATC
Locus tag: RB2654_20563
Name: liuR Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Locus tag: RB2654_20558
Name: acdH Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
Locus tag: RB2654_20553
Name: null Funciton: hypothetical protein
Locus tag: RB2654_20548
Name: null Funciton: hypothetical protein
Locus tag: RB2654_20543
Name: PF04828 Funciton: Glutathione S-transferase, unnamed subgroup (EC 2.5.1.18)
Locus tag: RB2654_20538
Name: acdA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Locus tag: RB2654_20533
Name: acdB Funciton: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) |
||||
| liuR-acdH-RB2654_20553-RB2654_20548-PF04828-acdA-acdB | -69 | 5.7 | GTTGACGTAAACGTAATC | RB2654_20563 |
| Roseobacter sp. MED193 | ||||
|
Position: -105
Score: 6.39046 Sequence: GCTTACGTAAACGTCAAG
Locus tag: MED193_05934
Name: liuR Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Locus tag: MED193_05939
Name: acdH Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
Locus tag: MED193_05944
Name: null Funciton: hypothetical protein
Locus tag: MED193_05949
Name: acdA3 Funciton: Acyl-CoA dehydrogenase, long-chain specific, mitochondrial precursor (EC 1.3.99.13)
Locus tag: MED193_05954
Name: PF04828 Funciton: Glutathione S-transferase, unnamed subgroup (EC 2.5.1.18)
Locus tag: MED193_05959
Name: acdA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Locus tag: MED193_05964
Name: null Funciton: hypothetical protein
Locus tag: MED193_05969
Name: acdB Funciton: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) |
||||
| liuR-acdH-MED193_05944-acdA3-PF04828-acdA-MED193_05964-acdB | -105 | 6.4 | GCTTACGTAAACGTCAAG | MED193_05934 |
| Roseovarius nubinhibens ISM | ||||
|
Position: -79
Score: 5.76226 Sequence: ACTTACGTAAACGTCAAT
Locus tag: ISM_02035
Name: liuR Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Locus tag: ISM_02040
Name: acdH Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
Locus tag: ISM_02045
Name: null Funciton: hypothetical protein
Locus tag: ISM_02050
Name: PF04828 Funciton: Glutathione S-transferase, unnamed subgroup (EC 2.5.1.18)
Locus tag: ISM_02055
Name: acdA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Locus tag: ISM_02060
Name: acdB Funciton: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) |
||||
| liuR-acdH-ISM_02045-PF04828-acdA-acdB | -79 | 5.8 | ACTTACGTAAACGTCAAT | ISM_02035 |
| Roseovarius sp. 217 | ||||
|
Position: -117
Score: 4.58294 Sequence: TCTTACGTCAACTTCAAA
Locus tag: ROS217_11336
Name: liuR Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Locus tag: ROS217_11341
Name: acdH Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
Locus tag: ROS217_11346
Name: null Funciton: hypothetical protein
Locus tag: ROS217_11351
Name: acdA3 Funciton: Acyl-CoA dehydrogenase, long-chain specific, mitochondrial precursor (EC 1.3.99.13)
Locus tag: ROS217_11356
Name: PF04828 Funciton: Glutathione S-transferase, unnamed subgroup (EC 2.5.1.18)
Locus tag: ROS217_11361
Name: acdA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Locus tag: ROS217_11366
Name: acdB Funciton: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) |
||||
| liuR-acdH-ROS217_11346-acdA3-PF04828-acdA-acdB | -117 | 4.6 | TCTTACGTCAACTTCAAA | ROS217_11336 |
| Silicibacter TM1040 | ||||
|
Position: -98
Score: 5.53768 Sequence: AGTTACGTAAACGTCAAG
Locus tag: TM1040_1556
Name: liuR Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Locus tag: TM1040_1557
Name: acdH Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
Locus tag: TM1040_1558
Name: null Funciton: hypothetical protein
Locus tag: TM1040_1559
Name: acdA3 Funciton: Acyl-CoA dehydrogenase, long-chain specific, mitochondrial precursor (EC 1.3.99.13)
Locus tag: TM1040_1560
Name: PF04828 Funciton: Glutathione S-transferase, unnamed subgroup (EC 2.5.1.18)
Locus tag: TM1040_1561
Name: acdA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Locus tag: TM1040_1562
Name: acdB Funciton: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) |
||||
| liuR-acdH-TM1040_1558-acdA3-PF04828-acdA-acdB | -98 | 5.5 | AGTTACGTAAACGTCAAG | TM1040_1556 |
| Silicibacter pomeroyi DSS-3 | ||||
|
Position: -87
Score: 6.27315 Sequence: GCTTACGTCAACGTCAAG
Locus tag: SPO2914
Name: liuR Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Locus tag: SPO2915
Name: acdH Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
Locus tag: SPO2916
Name: null Funciton: hypothetical protein
Locus tag: SPO2917
Name: PF04828 Funciton: Glutathione S-transferase, unnamed subgroup (EC 2.5.1.18)
Locus tag: SPO2918
Name: acdA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Locus tag: SPO2919
Name: null Funciton: hypothetical protein
Locus tag: SPO2920
Name: acdB Funciton: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) |
||||
| liuR-acdH-SPO2916-PF04828-acdA-SPO2919-acdB | -87 | 6.3 | GCTTACGTCAACGTCAAG | SPO2914 |