Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing PF04055 gene

Properties
Regulog: LexA - Pseudomonadaceae
Regulator type: Transcription factor
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Phylum: Proteobacteria/gamma
Built upon 101 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Pseudomonas aeruginosa PAO1
Position: -37
Score: 5.61187
Sequence: ACTGTATCCATATACAGT
Locus tag: PA0069
Name: PF04055
Funciton: DNA repair photolyase
PF04055 -37 5.6 ACTGTATCCATATACAGT PA0069
Pseudomonas entomophila L48
Position: -35
Score: 5.67157
Sequence: ACTGTATTCATATACAGT
Locus tag: PSEEN0052
Name: PF04055
Funciton: DNA repair photolyase
PF04055 -35 5.7 ACTGTATTCATATACAGT PSEEN0052
Pseudomonas fluorescens Pf-5
Position: -32
Score: 5.45919
Sequence: ACTGTATGTGCATACAGT
Locus tag: PFL_0057
Name: PF04055
Funciton: DNA repair photolyase
PF04055 -32 5.5 ACTGTATGTGCATACAGT PFL_0057
Pseudomonas mendocina ymp
Position: -34
Score: 5.45217
Sequence: ACTGTTCATATATACAGT
Locus tag: Pmen_4466
Name: PF04055
Funciton: DNA repair photolyase
PF04055 -34 5.5 ACTGTTCATATATACAGT Pmen_4466
Pseudomonas putida KT2440
Position: -31
Score: 5.96049
Sequence: ACTGTATATTAATACAGT
Locus tag: PP0099
Name: PF04055
Funciton: DNA repair photolyase
PF04055 -31 6 ACTGTATATTAATACAGT PP0099
Pseudomonas stutzeri A1501
Position: 217
Score: 5.97726
Sequence: ACTGTATATATAAACAGC
Locus tag: PST_4159
Name: PF04055
Funciton: DNA repair photolyase
PF04055 217 6 ACTGTATATATAAACAGC PST_4159
Pseudomonas syringae pv. tomato str. DC3000
Position: -34
Score: 5.29172
Sequence: ACTGTACGGATAAACAGT
Locus tag: PSPTO5254
Name: PF04055
Funciton: DNA repair photolyase
PF04055 -34 5.3 ACTGTACGGATAAACAGT PSPTO5254
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