Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing ruvB gene

Properties
Regulog: LexA - Alteromonadales
Regulator type: Transcription factor
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Phylum: Proteobacteria/gamma
Built upon 111 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Colwellia psychrerythraea 34H
Position: -60
Score: 5.67545
Sequence: TACTGTATAAATATATAGTG
Locus tag: CPS_2116
Name: ruvA
Funciton: Holliday junction DNA helicase RuvA
Locus tag: CPS_2117
Name: ruvB
Funciton: Holliday junction DNA helicase RuvB
ruvA-ruvB -60 5.7 TACTGTATAAATATATAGTG CPS_2116
Glaciecola sp. HTCC2999
Position: -69
Score: 5.26631
Sequence: ACTTGTATATATGTACAGTA
Position: -56
Score: 4.57203
Sequence: TACAGTATTTTAGTACACTA
Locus tag: GHTCC_010100005779
Name: ruvA
Funciton: Holliday junction DNA helicase RuvA
Locus tag: GHTCC_010100005774
Name: ruvB
Funciton: Holliday junction DNA helicase RuvB
ruvA-ruvB -69 5.3 ACTTGTATATATGTACAGTA GHTCC_010100005779
-56 4.6 TACAGTATTTTAGTACACTA
Pseudoalteromonas atlantica T6c
Position: -40
Score: 5.43435
Sequence: CACTGTATATAAAACCACTA
Locus tag: Patl_2944
Name: ruvB
Funciton: Holliday junction DNA helicase RuvB
ruvB -40 5.4 CACTGTATATAAAACCACTA Patl_2944
Pseudoalteromonas haloplanktis TAC125
Position: -69
Score: 5.29907
Sequence: TACTGGTAATTTATACAGTG
Locus tag: PSHAa1877
Name: ruvC
Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: PSHAa1876
Name: ruvA
Funciton: Holliday junction DNA helicase RuvA
Locus tag: PSHAa1875
Name: ruvB
Funciton: Holliday junction DNA helicase RuvB
ruvC-ruvA-ruvB -69 5.3 TACTGGTAATTTATACAGTG PSHAa1877
Pseudoalteromonas tunicata D2
Position: -66
Score: 5.17278
Sequence: CACTGGTAATTTATACAGTT
Locus tag: PTD2_22617
Name: ruvC
Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: PTD2_22612
Name: ruvA
Funciton: Holliday junction DNA helicase RuvA
Locus tag: PTD2_22607
Name: ruvB
Funciton: Holliday junction DNA helicase RuvB
ruvC-ruvA-ruvB -66 5.2 CACTGGTAATTTATACAGTT PTD2_22617