Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing umuD gene

Properties
Regulog: LexA - Vibrionales
Regulator type: Transcription factor
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Phylum: Proteobacteria/gamma
Built upon 186 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Photobacterium profundum SS9
Position: -4
Score: 5.41228
Sequence: AACTGTGCATACATACAGTG
Locus tag: PBPRB0973
Name: umuD
Funciton: DNA polymerase V, subunit UmuD
Locus tag: PBPRB0972
Name: umuC
Funciton: DNA polymerase V, subunit UmuC
umuD-umuC -4 5.4 AACTGTGCATACATACAGTG PBPRB0973
Vibrio angustum S14
Position: -10
Score: 5.88678
Sequence: AACTGTATAAATGTACAGTT
Locus tag: VAS14_12359
Name: umuD
Funciton: DNA polymerase V, subunit UmuD
Locus tag: VAS14_12354
Name: umuC
Funciton: DNA polymerase V, subunit UmuC
umuD-umuC -10 5.9 AACTGTATAAATGTACAGTT VAS14_12359
Vibrio fischeri ES114
Position: -27
Score: 5.2138
Sequence: CGCTGTACTTATATACAGTG
Locus tag: VF_1269
Name: umuD
Funciton: DNA polymerase V, subunit UmuD
umuD -27 5.2 CGCTGTACTTATATACAGTG VF_1269
Vibrio harveyi ATCC BAA-1116
Position: -26
Score: 6.33839
Sequence: TACTGTATATATAAACAGTA
Locus tag: VIBHAR_p08270
Name: umuD
Funciton: DNA polymerase V, subunit UmuD
Locus tag: VIBHAR_p08269
Name: umuC
Funciton: DNA polymerase V, subunit UmuC
umuD-umuC -26 6.3 TACTGTATATATAAACAGTA VIBHAR_p08270
Vibrio vulnificus CMCP6
Position: -29
Score: 5.93004
Sequence: AACTGTATATATGTACAGTT
Locus tag: VV1_0390
Name: umuD
Funciton: DNA polymerase V, subunit UmuD
Locus tag: VV1_0391
Name: umuC
Funciton: DNA polymerase V, subunit UmuC
umuD-umuC -29 5.9 AACTGTATATATGTACAGTT VV1_0390
© 2009-2020 RegPrecise