Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing topB gene

Properties
Regulog: LexA - Vibrionales
Regulator type: Transcription factor
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Phylum: Proteobacteria/gamma
Built upon 186 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Photobacterium profundum SS9
Position: -88
Score: 5.22896
Sequence: AACTGTTGTTATATCCAGTA
Locus tag: PBPRA2590
Name: topB
Funciton: DNA topoisomerase III (EC 5.99.1.2)
topB -88 5.2 AACTGTTGTTATATCCAGTA PBPRA2590
Vibrio angustum S14
Position: -86
Score: 5.6407
Sequence: AACTGGTTTTATATCCAGTA
Locus tag: VAS14_05738
Name: topB
Funciton: DNA topoisomerase III (EC 5.99.1.2)
topB -86 5.6 AACTGGTTTTATATCCAGTA VAS14_05738
Vibrio cholerae O1 biovar eltor str. N16961
Position: -84
Score: 5.51335
Sequence: TACTGGTTAAATTTACAGTT
Locus tag: VC2043
Name: topB
Funciton: DNA topoisomerase III (EC 5.99.1.2)
topB -84 5.5 TACTGGTTAAATTTACAGTT VC2043
Vibrio fischeri ES114
Position: -29
Score: 5.31483
Sequence: AACTGTCTATTCATACAGGT
Locus tag: VF_1641
Name: topB
Funciton: DNA topoisomerase III (EC 5.99.1.2)
topB -29 5.3 AACTGTCTATTCATACAGGT VF_1641
Vibrio harveyi ATCC BAA-1116
Position: -84
Score: 5.05334
Sequence: TACTGTTTACCTGTACAGTT
Locus tag: VIBHAR_03041
Name: topB
Funciton: DNA topoisomerase III (EC 5.99.1.2)
topB -84 5.1 TACTGTTTACCTGTACAGTT VIBHAR_03041
Vibrio parahaemolyticus RIMD 2210633
Position: -85
Score: 5.73735
Sequence: TACTGTTCATTTATACAGTT
Locus tag: VP2149
Name: topB
Funciton: DNA topoisomerase III (EC 5.99.1.2)
topB -85 5.7 TACTGTTCATTTATACAGTT VP2149
Vibrio salmonicida LFI1238
Position: -57
Score: 4.90115
Sequence: AACTGTCTATTCGTACAGGT
Locus tag: VSAL_I2155
Name: topB
Funciton: DNA topoisomerase III (EC 5.99.1.2)
topB -57 4.9 AACTGTCTATTCGTACAGGT VSAL_I2155
Vibrio shilonii AK1
Position: -90
Score: 5.52833
Sequence: AACTGGCTATTTATACAGTT
Locus tag: VSAK1_03504
Name: topB
Funciton: DNA topoisomerase III (EC 5.99.1.2)
topB -90 5.5 AACTGGCTATTTATACAGTT VSAK1_03504
Vibrio splendidus LGP32
Position: -85
Score: 5.98156
Sequence: AACTGTATAAACAACCAGTT
Locus tag: VS_0940
Name: topB
Funciton: DNA topoisomerase III (EC 5.99.1.2)
topB -85 6 AACTGTATAAACAACCAGTT VS_0940
Vibrio vulnificus CMCP6
Position: -87
Score: 5.75784
Sequence: AACTGTCTATACATACAGTT
Locus tag: VV1_3130
Name: topB
Funciton: DNA topoisomerase III (EC 5.99.1.2)
topB -87 5.8 AACTGTCTATACATACAGTT VV1_3130
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