Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing SO1392 gene

Properties
Regulog: SO1393 - Shewanellaceae
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process:
Effector:
Phylum: Proteobacteria/gamma
Built upon 20 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella loihica PV-4
Position: -97
Score: 6.47146
Sequence: GGTAGACCAAGTTGTCTACT
Position: -71
Score: 5.74312
Sequence: GGTAGACAGACTTGTCTACA
Locus tag: Shew_1680
Name: SO1392
Funciton: hypothetical HPP domain-containing protein
SO1392 -97 6.5 GGTAGACCAAGTTGTCTACT Shew_1680
-71 5.7 GGTAGACAGACTTGTCTACA
Shewanella oneidensis MR-1
Position: -203
Score: 6.57695
Sequence: AGTAGACAAATCAGTCTACT
Position: -165
Score: 5.12244
Sequence: TACAGACAAATCTGTCTACT
Locus tag: SO_1392
Name: SO1392
Funciton: hypothetical HPP domain-containing protein
SO1392 -203 6.6 AGTAGACAAATCAGTCTACT SO_1392
-165 5.1 TACAGACAAATCTGTCTACT
Shewanella sp ANA-3
Position: -208
Score: 6.45926
Sequence: GGTAGACAACTCAGTCTACC
Position: -173
Score: 5.92324
Sequence: AGCAGACAGATTGGTCTACC
Locus tag: Shewana3_2981
Name: SO1392
Funciton: hypothetical HPP domain-containing protein
SO1392 -208 6.5 GGTAGACAACTCAGTCTACC Shewana3_2981
-173 5.9 AGCAGACAGATTGGTCTACC
Shewanella sp MR-4
Position: -208
Score: 6.45926
Sequence: GGTAGACAACTCAGTCTACT
Position: -173
Score: 5.9957
Sequence: GGTAGACAGACTGGTCTACC
Locus tag: Shewmr4_2802
Name: SO1392
Funciton: hypothetical HPP domain-containing protein
SO1392 -208 6.5 GGTAGACAACTCAGTCTACT Shewmr4_2802
-173 6 GGTAGACAGACTGGTCTACC
Shewanella sp MR-7
Position: -208
Score: 6.45926
Sequence: GGTAGACAACTCAGTCTACT
Position: -173
Score: 5.56991
Sequence: AGTAGACAGACTGGTCTACA
Locus tag: Shewmr7_2885
Name: SO1392
Funciton: hypothetical HPP domain-containing protein
SO1392 -208 6.5 GGTAGACAACTCAGTCTACT Shewmr7_2885
-173 5.6 AGTAGACAGACTGGTCTACA
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