Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing SO1393 gene

Properties
Regulog: SO1393 - Shewanellaceae
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process:
Effector:
Phylum: Proteobacteria/gamma
Built upon 20 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella loihica PV-4
Position: -77
Score: 5.74312
Sequence: TGTAGACAAGTCTGTCTACC
Position: -51
Score: 6.47146
Sequence: AGTAGACAACTTGGTCTACC
Locus tag: Shew_1679
Name: SO1393
Funciton: Transcriptional regulator, TetR family
SO1393 -77 5.7 TGTAGACAAGTCTGTCTACC Shew_1679
-51 6.5 AGTAGACAACTTGGTCTACC
Shewanella oneidensis MR-1
Position: -129
Score: 5.12244
Sequence: AGTAGACAGATTTGTCTGTA
Position: -91
Score: 6.57695
Sequence: AGTAGACTGATTTGTCTACT
Locus tag: SO_1393
Name: SO1393
Funciton: Transcriptional regulator, TetR family
SO1393 -129 5.1 AGTAGACAGATTTGTCTGTA SO_1393
-91 6.6 AGTAGACTGATTTGTCTACT
Shewanella sp ANA-3
Position: -98
Score: 5.92324
Sequence: GGTAGACCAATCTGTCTGCT
Position: -63
Score: 6.45926
Sequence: GGTAGACTGAGTTGTCTACC
Locus tag: Shewana3_2980
Name: SO1393
Funciton: Transcriptional regulator, TetR family
SO1393 -98 5.9 GGTAGACCAATCTGTCTGCT Shewana3_2980
-63 6.5 GGTAGACTGAGTTGTCTACC
Shewanella sp MR-4
Position: -98
Score: 5.9957
Sequence: GGTAGACCAGTCTGTCTACC
Position: -63
Score: 6.45926
Sequence: AGTAGACTGAGTTGTCTACC
Locus tag: Shewmr4_2801
Name: SO1393
Funciton: Transcriptional regulator, TetR family
SO1393 -98 6 GGTAGACCAGTCTGTCTACC Shewmr4_2801
-63 6.5 AGTAGACTGAGTTGTCTACC
Shewanella sp MR-7
Position: -98
Score: 5.56991
Sequence: TGTAGACCAGTCTGTCTACT
Position: -63
Score: 6.45926
Sequence: AGTAGACTGAGTTGTCTACC
Locus tag: Shewmr7_2884
Name: SO1393
Funciton: Transcriptional regulator, TetR family
SO1393 -98 5.6 TGTAGACCAGTCTGTCTACT Shewmr7_2884
-63 6.5 AGTAGACTGAGTTGTCTACC
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