Orthologous regulated operons containing rbsD gene
| Regulog: | RbsR - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Ribose utilization |
| Effector: | Ribose |
| Phylum: | Proteobacteria/gamma |
| Operon | Position | Score | Sequence | Locus Tag of the First Gene |
|---|---|---|---|---|
| Shewanella halifaxensis HAW-EB4 | ||||
|
Position: -113
Score: 6.20481 Sequence: ATATCGAAACGTTTCGATTA
Position: -80
Score: 6.34657 Sequence: TTATCGAAACGTTTCGATCG
Locus tag: Shal_0578
Name: rbsD Funciton: D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1)
Locus tag: Shal_0579
Name: rbsA Funciton: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
Locus tag: Shal_0580
Name: rbsC Funciton: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
Locus tag: Shal_0581
Name: rbsB Funciton: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)
Locus tag: Shal_0582
Name: rbsK Funciton: Ribokinase (EC 2.7.1.15)
Locus tag: Shal_0583
Name: rbsR Funciton: Transcriptional repressor of ribose utilization, LacI family |
||||
| rbsD-rbsA-rbsC-rbsB-rbsK-rbsR | -113 | 6.2 | ATATCGAAACGTTTCGATTA | Shal_0578 |
| -80 | 6.3 | TTATCGAAACGTTTCGATCG | ||
| Shewanella pealeana ATCC 700345 | ||||
|
Position: -126
Score: 6.20481 Sequence: ATATCGAAACGTTTCGATTA
Position: -93
Score: 6.34657 Sequence: TTATCGAAACGTTTCGATCG
Locus tag: Spea_0514
Name: rbsD Funciton: D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1)
Locus tag: Spea_0515
Name: rbsA Funciton: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
Locus tag: Spea_0516
Name: rbsC Funciton: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
Locus tag: Spea_0517
Name: rbsB Funciton: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)
Locus tag: Spea_0518
Name: rbsK Funciton: Ribokinase (EC 2.7.1.15)
Locus tag: Spea_0519
Name: rbsR Funciton: Transcriptional repressor of ribose utilization, LacI family |
||||
| rbsD-rbsA-rbsC-rbsB-rbsK-rbsR | -126 | 6.2 | ATATCGAAACGTTTCGATTA | Spea_0514 |
| -93 | 6.3 | TTATCGAAACGTTTCGATCG | ||